Serratia ficaria: SAMEA4384070_0575
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Entry
SAMEA4384070_0575 CDS
T06444
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
sfj
Serratia ficaria
Pathway
sfj03030
DNA replication
sfj03430
Mismatch repair
sfj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA4384070_0575 (holC)
03430 Mismatch repair
SAMEA4384070_0575 (holC)
03440 Homologous recombination
SAMEA4384070_0575 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfj03032
]
SAMEA4384070_0575 (holC)
03400 DNA repair and recombination proteins [BR:
sfj03400
]
SAMEA4384070_0575 (holC)
Enzymes [BR:
sfj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA4384070_0575 (holC)
DNA replication proteins [BR:
sfj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA4384070_0575 (holC)
DNA repair and recombination proteins [BR:
sfj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA4384070_0575 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
SNV86313
UniProt:
A0A240ATZ1
LinkDB
All DBs
Position
1:complement(623648..624097)
Genome browser
AA seq
149 aa
AA seq
DB search
MKQATFYLIEQAEPAGALSAHEAVACAVAAERWRSGKRVLIACESQEQAQRLDEALWQRE
PHQFVPHNLAGEGPHYGAPVELCWPGKRGNAPRDLLIALLPQFADFATAFHEVVDFVPYE
DTLKQLARDRYKAYRSVGFHLTTATPPTH
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggcaacgttctatctaatcgaacaggcggaaccggcgggcgcgctcagcgcc
catgaggccgtagcctgcgccgttgccgccgagcgttggcgttccggcaagcgggtgctg
atcgcctgcgagagccaggaacaggcccagcggctggacgaagcgctgtggcagcgcgag
ccccatcagttcgtgccgcacaacctggccggcgaagggccgcactacggcgccccggtg
gagctgtgctggcccggcaaacgcggcaatgccccgcgcgatctgctgatcgccctgctg
ccgcagtttgcagattttgctaccgctttccatgaagtggtagacttcgtcccttacgaa
gacaccctgaaacagttggcgcgcgaccgttacaaagcctatcgcagcgtcggcttccat
ttgaccacggctacgccgccaactcactga
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