Serratia ficaria: SAMEA4384070_1626
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Entry
SAMEA4384070_1626 CDS
T06444
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sfj
Serratia ficaria
Pathway
sfj00521
Streptomycin biosynthesis
sfj00523
Polyketide sugar unit biosynthesis
sfj00541
O-Antigen nucleotide sugar biosynthesis
sfj01100
Metabolic pathways
sfj01110
Biosynthesis of secondary metabolites
sfj01250
Biosynthesis of nucleotide sugars
Module
sfj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SAMEA4384070_1626 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SAMEA4384070_1626 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SAMEA4384070_1626 (rmlC)
Enzymes [BR:
sfj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SAMEA4384070_1626 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
DUF4738
Motif
Other DBs
NCBI-ProteinID:
SNV97628
UniProt:
A0A240BRU9
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Position
1:1705984..1706520
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AA seq
178 aa
AA seq
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MQVIDTKIEGVKIIQPKVFGDARGFFLETFEKKRYQEMLNIDLDFVQDNHSRSAKGVLRG
LHFQKVNPQGKLVRVVRGEVFDVAVDIRPDSPTYGAWEGVILSEENKTQFWVPPGLAHGF
VVLSDIADFEYKCTDYYNPAHEGCLLWNDPEVGIEWPIDNPLLSEKDKVGKLFKELAK
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttatcgacacaaaaattgaaggcgtaaaaattattcagcctaaggtcttcggt
gatgcgcgcggtttcttcctggaaaccttcgagaaaaaacgctaccaagaaatgctgaat
atcgatcttgattttgttcaggacaaccattcgcgttccgccaaaggcgtgttgcgcggc
ttgcattttcaaaaagtaaatccgcaaggtaagctggttcgcgtagtccgcggcgaagtt
ttcgatgtggccgtcgatattcgtccggattcaccgacctacggcgcctgggaaggcgtc
attctgtcggaagagaacaagacgcaattttgggtcccgccaggcttggcacatggtttc
gtggttctttccgatattgccgatttcgaatataaatgcacggattactacaacccggcg
catgaaggttgtctgctgtggaacgatcctgaagttggtatcgaatggccaattgataat
ccactgctttctgagaaagataaagtcggtaagttgtttaaggagttggccaaatga
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