Serratia ficaria: SAMEA4384070_4638
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Entry
SAMEA4384070_4638 CDS
T06444
Symbol
gabR_4
Name
(GenBank) HTH-type transcriptional regulatory protein gabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfj03000
]
SAMEA4384070_4638 (gabR_4)
Transcription factors [BR:
sfj03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SAMEA4384070_4638 (gabR_4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Motif
Other DBs
NCBI-ProteinID:
SNW06026
UniProt:
A0A240CFF9
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All DBs
Position
1:4952105..4953601
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AA seq
498 aa
AA seq
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MMPRKARVVEVPAIGQLDRQAGRLSQQLAQALRAAINKGELKAGDLLPSTRRLSAALRLA
RGTVLEAFAQLTAEGFLAPQPGSGTRVAGSLAPRRVRLSPAKSPSAAAPPLAEQAQRLAR
FAAQVRPLPPVPFAVSVPIGETAPDDIWRRLGNRIRARGPGAPSGYGDPMGALPLREALC
EYVRRSRSVSCTPQQIIITSGTQQGLYLAAQILLDAGDAAWVEDPAYSGITAIFDNVFRD
RRMIRVPVADDGIDVAAGAGLAAQARAAFVTPSHQYPLGMPMSMAKRTALLAWARERQAW
IVEDDYDSEMRYAGHPFPSLQGLDPDRVVYLGTFSKVLFPSLRLGYAIVPPPLVDAFCGA
RMLMDRHPPSADQHVLAAFIAEGYLDRHIRKMRGVYAEKRRVLIAAIDAHLDPELAWLQP
CDQGMHTVLWLKAGFDDLQVAERANRAGLALRAVSPMYAVGHGKPGLVLGLGGHSDRAVD
QAVQKLGQVIRACAAPAP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgagaaaagccagggtcgttgaagttcccgccatcggtcagctcgatcgccag
gcggggcggctgagccagcagctggcgcaggcgctgcgcgccgccatcaataagggcgaa
ctgaaggcgggcgatctgctgccctccacccggcggttgtccgcggcgctcaggctggcc
agaggcaccgtgctggaggctttcgcccagctgaccgccgaaggttttctcgcaccgcag
ccgggatccggcacccgggtggccggttcgctggcgccgcgcagggtgcgcctctccccc
gcaaagtccccctcggcggcagcgccgccgctggcggagcaagcgcagcgcctggcccgt
ttcgccgcccaggtgcgccctctgccgccggtgcccttcgccgtgtcggtgcccatcggc
gagaccgcgccggacgatatctggcgccggctcggcaaccgcattcgcgcccgcgggccg
ggcgcgccgtcgggttacggcgatcccatgggggcactgccgctgcgcgaggccctctgc
gaatacgttcgccgctcccgctccgtaagctgcacgccgcagcaaatcattattacctca
ggcacccagcaggggctctatctggccgcgcaaatactgctggacgccggcgacgccgcc
tgggttgaagatcccgcctactcgggcattaccgccattttcgacaacgtcttcagggac
cgccgcatgatcagggtgcccgtcgccgacgacggcatcgacgtcgccgccggcgccggg
ctcgccgctcaggcccgcgccgcctttgtcaccccttctcatcaatatccgctcggcatg
ccgatgagcatggccaaaagaaccgccctgctggcctgggccagggaacggcaggcctgg
atcgttgaagatgattacgacagcgagatgcgctatgccggccacccgtttccctcattg
caagggctggatcccgacagggtcgtctatctgggcaccttcagcaaagtgctgttcccc
tcgctgcggctgggctacgccatcgttcccccgccgctggtcgacgctttttgcggtgcc
agaatgctgatggaccgccatccgcccagcgccgatcagcacgtgctggccgcttttatc
gccgaagggtatctggaccggcatatccgcaaaatgcgcggcgtttatgcggagaagcgt
cgggtgctgatcgcggcgatagacgcccacctcgaccctgagctggcctggctgcagccc
tgcgatcagggtatgcatacggtgctgtggttaaaggcgggtttcgacgatctgcaggtg
gccgagcgcgcgaaccgggccggcctggcgctgcgcgccgtttcgccgatgtatgccgtc
ggccacggcaagcccggactggtgctcgggctgggcggccacagcgatcgcgcggtcgac
caggcggtgcaaaagcttgggcaggtcatccgcgcctgcgccgcccctgcgccctaa
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