Serratia ficaria: SAMEA4384070_4705
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Entry
SAMEA4384070_4705 CDS
T06444
Symbol
trmA
Name
(GenBank) tRNA (uracil(54)-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sfj
Serratia ficaria
Brite
KEGG Orthology (KO) [BR:
sfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfj03016
]
SAMEA4384070_4705 (trmA)
Enzymes [BR:
sfj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
SAMEA4384070_4705 (trmA)
Transfer RNA biogenesis [BR:
sfj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SAMEA4384070_4705 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Cons_hypoth95
Methyltransf_11
Methyltransf_15
Methyltransf_31
Methyltransf_12
PrmA
Met_10
DREV
Motif
Other DBs
NCBI-ProteinID:
SNW06198
UniProt:
A0A240CGQ4
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All DBs
Position
1:5038755..5039858
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AA seq
367 aa
AA seq
DB search
MTPENLPIERYDDQLAEKTARLKTLMSPFAAPEPEVFRSPVSHYRMRAEFRIWHDEDEMY
HIMFDQQTKQRIRVDQFPAASELINRLMSALIAAIKPDPTLRHKLFQIDYLSTQSGKIIA
SLLYHRKLDDAWQQRATQLRDSLRAQGFDLQLIGRAAKMKIMLDKDHVDEVLPVAGRDMI
YRQVENSFTQPNAAMNVQMLEWALEVTAGSTGDLLELYCGNGNFSLALARNFERVLATEI
AKPSVAAAQYNIAANHIDNVQIIRMAAEDFTQAMNGVREFNRLKGIDLSGYNCETIFVDP
PRSGLDDETVKMVQAYPRILYISCNPDTLCANLATLQETHRVSRLALFDQFPYTHHMECG
VLLEKRR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgagaatttgcctattgaacgttacgatgaccagctggcggagaaaaccgcc
cgcctgaagacgttgatgtcaccgttcgcggcgcccgagccggaagtgttccgctcgcca
gtgagccactaccgcatgcgcgcagaattccgcatctggcatgatgaagacgagatgtac
cacatcatgttcgaccagcagaccaagcagcgcatccgcgtcgatcaattcccggccgcc
agcgaactgatcaaccgcctgatgagcgcgctgattgccgccatcaagccagacccgacg
ctgcgccacaagctgttccagatcgattatctgtcgacgcaaagcggcaaaatcatcgct
tcgctgctgtaccaccgcaagctggacgacgcctggcagcaacgcgctacgcagctgcgc
gacagcctgcgcgcccagggcttcgatctgcagttgattggccgcgccgcgaagatgaaa
atcatgctggacaaggatcacgtggacgaagtgctgccggtcgccggtcgcgacatgatt
taccgccaggtggagaacagcttcacccagccgaacgcggcgatgaacgtgcagatgctg
gagtgggcgctggaagtcaccgccgggtcaacaggcgatttgctggaactgtactgcggc
aacggcaacttttcgctggcgctggcgcgcaactttgagcgcgtgctggccaccgagata
gccaaaccgtccgtcgcggcggcgcaatacaatatcgccgccaaccacatcgacaacgtg
cagatcatccgcatggcggcggaagactttacccaagcgatgaacggggtgcgcgagttt
aaccggctgaagggcatcgatctgagcggctacaactgcgagaccattttcgtcgatccg
ccgcgcagcggtctggatgacgaaacggtgaagatggtgcaggcctatccgcgcattctg
tatatctcatgcaatccggacacgctgtgcgccaacctggcaacgttgcaggaaacgcat
cgggtgagccgcctggcgctgttcgaccagttcccctacacccaccatatggaatgcggc
gtgctgctggaaaaacgccgctga
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