Streptomyces formicae: KY5_6844 Help Entry KY5_6844          CDS       T05416                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism sfk  Streptomyces formicae Pathway sfk03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:sfk00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     KY5_6844  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sfk03400]     KY5_6844 Enzymes [BR:sfk01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      KY5_6844 DNA repair and recombination proteins [BR:sfk03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      KY5_6844 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S Motif Other DBs NCBI-ProteinID:  ATL31862 UniProt:  A0A291QJW0 LinkDB All DBs Position 7969802..7970743 Genome browser AA seq 313 aa AA seqDB search MDDVRKVRAGRRTVRLNRPDKILFPASGDGNGRADGGREYTKADLFDYYRSVAPFMLPHL RGRPLMLERHPDGLEGPRFMQKDTPDHYPDWITRAEVAKRGGTVTHIVCDDTATLLFLAD QACLTLHRWLSRTGRVEHPDRLVFDLDPAKDDFGAVRVAALLLGELLDQVGLPSALMTTG SRGLHVVVPLNGHHDFDDVRAFAKDVAETLAAARPEALTTAVRKEERGDRLYLDVQRNAY AQTAVAPFSVRSAPGAPVAVPLAWEQLDAPATHARRWNIEDAVEQARTDPWAGVPRSGRA LGPARRKLRALRD NT seq 942 nt NT seq  +upstreamnt  +downstreamnt atggacgacgtacggaaggtgcgggcagggcgccgcaccgtacggctgaaccggccggac aagatcctcttcccggcctccggggacggcaacggccgcgcggacggcggccgggagtac acgaaggccgacctcttcgactactaccggtccgtcgcccccttcatgctgccgcacctg cgcggccgccccctgatgctggagcgccaccccgacggccttgagggcccccgcttcatg cagaaggacacccccgaccactacccggactggatcacccgcgccgaggtggccaagcgg ggcggcaccgtcacgcacatcgtgtgcgacgacaccgcgacgctcctcttcctcgccgac caggcctgtctgaccctgcaccgctggctctcgcgcaccggccgcgtcgagcaccccgac cggctcgtcttcgacctcgaccccgccaaggacgacttcggcgccgtgcgtgtcgcggcc ctgctgctcggcgagctcctcgaccaggtgggcctgccgtccgccctgatgacgacgggc tcgcgcgggctgcacgtcgtcgtgccgctcaacggccaccacgacttcgacgacgtgcgc gccttcgcgaaggacgtcgcggagacgctcgccgccgcccgtcccgaggcgctcaccacg gccgtacgcaaagaggagcgcggcgaccggctctacctcgacgtgcagcgcaacgcctac gcgcagaccgccgtcgcccccttctcggtgcgctccgcgccgggcgcgccggtcgccgtg ccgctcgcctgggagcagctcgacgcccccgcgacgcacgcccgccgctggaacatcgag gacgccgtcgagcaggcccgcaccgatccgtgggcgggcgtcccgcgctcggggcgcgcc ctcggcccggcccgccgcaagctgcgcgcgctgcgcgactga

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