Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01210
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Entry
SPHFLASMR4Y_01210 CDS
T04949
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfla03009
]
SPHFLASMR4Y_01210 (rluB)
Enzymes [BR:
sfla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SPHFLASMR4Y_01210 (rluB)
Ribosome biogenesis [BR:
sfla03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SPHFLASMR4Y_01210 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6494
Stm1_N
Motif
Other DBs
NCBI-ProteinID:
ASK87976
UniProt:
A0A220W570
LinkDB
All DBs
Position
1268542..1269354
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AA seq
270 aa
AA seq
DB search
MTEEKPAKIYRAKPTPGAKAPAAAKAPASDVREGQRIAKLLARAGVASRREIERMIDAGR
IELNGDPVEHPSLLLKNLTGITVDGKPVAEPSPAKLYRFHKPNGYLTAERDFSGKKTIYD
VLPKDMERIMPIGRLDMNTEGLLLMTTDGEFKRQMELPKNGIERSYRARTFGDITQNELE
ELYRGITIDGMRYGPITANLERRTGRNQWIEVTLTEGKNREVRRVLEHFGLEVSRLIRTR
YGPFVLGDLEKGEIEAVRQHDLVQFRKTLK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagagaaaccagccaagatatatcgcgcaaaaccgacccccggagcgaaggcc
ccggcggccgccaaagcgcctgcgagcgacgttcgcgaaggccagcgcattgccaagctt
ctggcccgcgccggcgtggcgtcgcggcgtgaaatagagcggatgatcgatgcgggacgg
atcgagctgaacggcgatccggtcgagcatccttcgctgttgctcaagaacctgaccggc
atcactgtcgatggcaagccggtggcagagccctccccggcgaaattataccgctttcac
aagcccaatggctatctgaccgcagagcgcgacttttccggcaagaagacgatctacgac
gtcctgcccaaggatatggagcggatcatgccgatcggtcggctcgacatgaacaccgag
ggcctgctgctgatgaccaccgacggcgagttcaagcggcagatggaattgccgaaaaac
ggcatcgaacggtcctaccgggcgcggacgttcggcgacatcacccagaacgagctcgaa
gaactctatcgcggcattaccattgacggcatgcgctacgggccgatcaccgccaatctg
gagcggcgcaccggccgcaaccagtggatcgaagtgacgctgaccgaaggcaagaaccgc
gaagtccgccgggtgctggagcattttggcctggaagtctcccgcttgatccgcacccgt
tacggccccttcgttctgggcgatttggaaaaaggcgagattgaagcggtgcgccagcac
gacctggtccagttccggaagacgctgaaatga
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