Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01338
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Entry
SPHFLASMR4Y_01338 CDS
T04949
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla03030
DNA replication
sfla03430
Mismatch repair
sfla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPHFLASMR4Y_01338
03430 Mismatch repair
SPHFLASMR4Y_01338
03440 Homologous recombination
SPHFLASMR4Y_01338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfla03032
]
SPHFLASMR4Y_01338
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_01338
Enzymes [BR:
sfla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPHFLASMR4Y_01338
DNA replication proteins [BR:
sfla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPHFLASMR4Y_01338
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPHFLASMR4Y_01338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
ASK88103
UniProt:
A0A220W5N4
LinkDB
All DBs
Position
complement(1399313..1399750)
Genome browser
AA seq
145 aa
AA seq
DB search
MQVDFYHLTRDPADKLVPMLASKSLDVGKRLLLLAPDEDRCATLSDALWSADPVSFLAHD
LAGSEQEADQPILISDRCEAANGASYIVLSDGLWRDGALDFERAFFLFTPDQIDHARTVW
RDMTARADVTPRYWKQDGGRWVEGP
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggttgatttctatcacctgacccgcgatccggcagataaactggtgccaatgctg
gcgagcaagtcgctggatgtcgggaaaagactgttactgctggcaccggacgaagaccgc
tgcgccacgctgagtgatgccctgtggagtgccgatccggtcagttttctcgcgcacgat
cttgccggatccgagcaagaggctgaccagccgatcctgatttccgatcggtgcgaggcg
gcaaacggagcatcgtatatcgttctgtccgacggcttgtggcgggacggtgcgctggat
ttcgagcgcgccttcttcctgttcaccccggaccagatcgaccatgcccgaaccgtctgg
cgggatatgacggcccgggcagatgtcaccccgcgctactggaagcaggacggtggtcgc
tgggtcgagggtccctga
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