Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02701
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Entry
SPHFLASMR4Y_02701 CDS
T04949
Symbol
ligB
Name
(GenBank) DNA ligase B
Organism
sfla
Sphingorhabdus sp. SMR4y
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ASK89439
UniProt:
A0A220W9F9
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Position
2774301..2775872
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AA seq
523 aa
AA seq
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MRRFAALIDSLVYTRSRNAKLAAIAGYLRETPDPDRGWALAALTDSLDFPAVKSATIRNL
AGTRIDPELFRLSRHHVGDTAETVALVWPEAEGRVQGDPGIDEVVQALVAANRTTAPDIV
ADLLDSMDSNSRYAMLKLAVGGMRVGVSARLAKTAFAQAFDVALDDVEELWHALDPPYDR
LFAWAEKGGARPDLSATPFFRPFMLSHPFEGDSLDLDQYAVEWKWDGIRVQAVHLGGETR
LYSRGGDDISASFPDIVEAFDRDGVIDGELLVRGTDQGGEAASFNALQKRLGRKTVSKKM
RQEFPAFVRVYDLLMDGGTDLRLSPWHERRQRLESFVPKLHQDHFDLSAVVDVDDFAALE
EMRAGARDAAIEGVMLKRRESPYLAGRVTGHWYKWKRDPLNADCVMMYAQRGNGRRASFY
SDYTFGCWTEDGELLPVGKAYSGFTDEELKWLDRFVRQNTLNRFGPVREVKKSLVLEVAF
DSIHESGRHKSGLAMRFPRIHRIRKDKPAEEADRIATLQAMIS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgctttgccgccctgatcgacagtctggtctatacgcgatcgcgcaacgccaag
ctggcggcgatcgccggctatttgcgcgaaacgcccgaccccgatcgcggctgggcgctg
gcggcgctgaccgacagtttggattttccggcggtcaagtccgcgaccatccgcaatctc
gccggcacaagaatcgatcccgaactgttccgtctgtcgcgccaccatgtcggcgacacc
gccgaaaccgtggcgctggtctggccggaagcggaagggcgcgtgcagggcgatccaggc
atcgacgaagtggtgcaggcgctggttgccgccaatcgcacgaccgcgcccgacattgtc
gcggacttgctcgacagcatggacagcaacagccgctatgcgatgctcaagctggcggtc
ggcgggatgcgggtcggggtgtcggcgaggctggcgaagaccgccttcgcgcaggccttt
gacgtggcgctggatgacgtcgaggagctctggcacgcgcttgacccgccctatgacaga
ctgttcgcatgggcagagaagggcggcgcgcgtcccgacctgtcggcaacgcccttcttc
cggccgttcatgttgtctcatccgttcgagggcgatagccttgatctcgatcaatatgcg
gtcgagtggaaatgggacgggatccgcgtgcaggcggtgcatctcggcggcgagacccgg
ctctacagccgcggcggcgatgatatcagcgcgtctttccccgacattgtcgaagcgttc
gaccgcgacggcgtgatcgatggcgaattgctggtccgtggcaccgaccagggcggcgaa
gcggcgagtttcaacgcgctgcagaagcggctcggtcgcaagaccgtctcgaaaaagatg
cggcaggaatttcccgcctttgtccgggtctatgatctgctgatggacgggggcacggac
ctgcgcctgtcgccctggcacgaacggcggcagcggctcgaaagttttgtgcccaagctg
catcaagaccatttcgatctttcggcggtggtcgatgtcgatgatttcgctgcgctcgaa
gaaatgcgcgccggggctcgcgatgcggccattgaaggcgtgatgctgaaacggcgcgaa
agcccctatctcgccggacgggtcaccggtcactggtataaatggaagcgcgacccgctg
aatgctgattgcgtgatgatgtacgcgcagcgcggcaacgggcggcgtgcgtccttctat
tccgactatacattcggctgctggaccgaggacggcgaactgctgccggtcggcaaggcc
tattccggcttcaccgacgaagagctgaaatggctcgaccgcttcgtccggcagaatacg
ctgaaccgcttcgggccggtgcgcgaggtgaagaagtcgctggtgctggaagtcgcgttc
gattcgatccacgaaagcggccgccacaaatccggtctcgccatgcgcttcccgcgcatc
caccgcatccgcaaggacaagccggccgaggaagcggaccggatcgcgaccttgcaggcg
atgatttcctag
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