Scleropages formosus (Asian bonytongue): 108920360
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Entry
108920360 CDS
T04919
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108920360 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108920360 (ddx46)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108920360 (ddx46)
Spliceosome [BR:
sfm03041
]
Complex A
U2 snRNP components
U2 related factors
108920360 (ddx46)
Complex B
108920360 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
108920360
NCBI-ProteinID:
XP_018584586
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All DBs
Position
21:complement(9708912..9721847)
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AA seq
1052 aa
AA seq
DB search
MGRESRHYRKRSSSRGRSGSRSKSRSPDKRSKRDDRGGSRNRDRDRGRRERSRSRERRRS
RSRDRKRPRRSRSRERRRSRSRERRRSRSRSRRRSRSTTPSKSKKSDIRSKSKEKSDNPE
PSSEKKKIKEEKEEEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEL
EEMKQGKKWSLEDDDDDDEEGPAAPEPEEEQEPAVEPVPVKEEAGEELDPLDAYMEEVKE
EVKKFNMGTMKGGNDKKGGMTVTKVMTVVTTKKTPSTTKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKVLEPVDHQKIEYEPFRKNFYVEVPELAKMTQEEVDVYRLELEGI
TVKGKGCPKPIKTWVQCGISMKILNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHILDQRPLEESEGPIAVIMTPTRELALQITKECKKFSKPLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNIRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVI
DEDSKFLKLLEILGHYQEKGSVIIFVDKQEHADALLKDLMKASYPCMSLHGGIDQYDRDS
IINDFKNGACRLMVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEEQARYAGDIIKALELSGSQVPSELEQLWLNFKDQQKAEGKTIKSSSGFSGKGFKF
DETEHALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDLSAPGGGGAGG
GSAAVAATTAAAAAGLTGIAMPSAGNIQKLELAKKLAIKINAQKNLGAEAQDVMQQATNA
ILRGGTIMAPSVSAKTIAEQLAEKINAKLNYIPLEKMEEERQNADQTETIKRYEEELEIN
DFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQ
KAKAEITRLIKEELIRLQNSYQPAMKGRYKVL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggacgggagtcgaggcattaccgcaagcgatcatcctcgaggggccggtctggaagt
cgctctaaaagccgctctccagacaagcgctccaagcgtgatgaccgtggaggatctcgc
aaccgggacagagaccgtggccgcagggagaggtcccgcagccgggaacgcagacgttca
cggtctcgagacaggaaacgccccaggcgctctcggagccgggagaggcggcggtctcgc
agtcgtgagcgtagaagatctcgaagccggagtaggagaagatcacggtctacgaccccc
agcaagagcaagaaaagtgacatcagatcaaagagtaaagaaaagtctgataacccagag
ccatcttcagagaagaaaaaaataaaagaagaaaaagaggaggaaaaagttgaggatcaa
gactttgatcagaacaagctggaggaagagatgaggaagaggaaggagcgtgtggagaag
tggagggaggagcagcggaaaaaggctatggagaacataggggagctgaagaaagagctt
gaggagatgaagcagggcaagaagtggagtctggaggatgatgatgatgatgatgaggaa
ggcccagctgccccagagcctgaagaggaacaggagccagctgtagaacctgtacctgtg
aaggaggaggctggtgaagagctggaccctctggatgcctacatggaggaggtgaaggag
gaggtgaagaagttcaacatgggaactatgaaaggcgggaatgacaagaagggaggcatg
actgtgaccaaagtgatgactgtggtcaccaccaaaaagacgccaagcaccactaagaag
aagggcgagttgatggagaatgatcaggatgccatggagtattcctcagaggaagaggag
gtggacctgcagactgcactcacaggctatcaaaccaagcaaaggaaggttcttgagccc
gtggaccatcagaagattgagtatgaacccttccgcaagaatttctatgttgaggtgccc
gagctggccaagatgacacaggaagaggtggatgtgtaccggttggagctggagggaatc
actgtgaaggggaaaggctgcccaaaacccatcaaaacttgggtgcagtgtggtatctcc
atgaagatcttaaatgcgcttaaaaagcacaactacgagaagcctacccccatccaggct
caggccattcctgcaatcatgtctgggcgggatctgatcggtatcgccaaaactggcagt
gggaagaccattgctttcctcctgcctatgttccgtcacatcttggaccagaggcccttg
gaggagtctgaaggccccatagctgtgatcatgacccccaccagagagctggctctgcaa
atcaccaaagagtgcaagaagttctctaaacccctggggctgagggtcgtctgtgtgtat
ggaggcactggaattagtgaacagattgctgagctgaagagaggggcagagatcatcgtc
tgcacacctgggcgaatgatcgacatgttgggtgctaacagtggtcgagtaaccaacctc
cggagagtcacatatgtggttctagacgaagcagaccggatgtttgacatggggtttgag
ccacaggtcatgcggattgtggacaacatccggccggaccggcagacggttatgttttct
gccacattcccacgagccatggaggcactggccagaaggatcctgtccaagcccatcgag
gtgcaagtgggaggccggagtgtagtatgctctgatgtggagcagcatgtgattgtgatt
gacgaagacagcaagttcctcaaactgcttgagatcctgggtcactaccaggagaagggc
tccgtcatcatcttcgtggacaagcaggaacatgcagatgcactgctgaaggacctaatg
aaggcctcctacccctgcatgtcccttcacggaggaatcgaccaatatgaccgagacagc
atcatcaatgactttaagaatggtgcttgccgactgatggtagccacatcagtggctgcc
cgcggactggacgtcaagcagctcatcctggtggtcaactacagttgcccaaaccactac
gaggattacgttcacagagctggacgcaccggcagagctgggaacaaaggctatgcatat
acgttcatcacagaggagcaggcccgctacgctggagacatcatcaaagccctggaactc
tctgggtcccaagtgccctcggagctggagcagttgtggttgaactttaaggatcagcag
aaagctgagggcaagaccatcaaaagcagcagcggcttctctgggaagggtttcaagttt
gatgagacagagcacgccttggccaacgagaggaagaagctgcagaaagcagctctcggc
ctgcaggattcagatgatgaggacacagccctggacatcgatgagcagattgagagcatg
ttcaattccaagaagcgagtgaaagacctgtctgctccgggtggtggcggtgctggtgga
gggtcagcagcagtggctgcaactacggcggcagctgctgccgggctgacgggcattgcc
atgccatctgccggcaatattcagaagctagagcttgccaagaagctggccatcaaaatc
aacgctcagaagaacctgggggcagaggctcaggacgtgatgcaacaagctactaatgcc
attctgagaggcggaactatcatggccccatccgtatccgccaagactattgcggagcag
ctggcggagaagatcaatgccaagctcaactacatcccgctggagaaaatggaggaggag
aggcagaatgcagaccagactgaaaccataaagcgatacgaagaggagctggagatcaac
gacttcccacagacggccaggtggaaagtcacatcgaaggaggcgctccagaggattggg
gagtactcggaggcagccatcaccatcagagggacatatttccctcctggaaaggaaccc
aaggagggagagcgcaagatctacttagctattgagagtgccaatgagctggctgtacag
aaagccaaagcagagatcaccagactcatcaaagaggagctcatccgcttgcaaaactcc
taccagccagccatgaaaggaagatacaaagtcttgtag
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