Scleropages formosus (Asian bonytongue): 108921344
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Entry
108921344 CDS
T04919
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108921344
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108921344
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108921344
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108921344
Peptidases and inhibitors [BR:
sfm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108921344
Ubiquitin system [BR:
sfm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108921344
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108921344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
108921344
NCBI-ProteinID:
XP_018586310
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All DBs
Position
25:14537410..14555351
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AA seq
868 aa
AA seq
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MAMDLGELMVPYMPTIRVPRTGDRVFKSECAFSYDTPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYLHLKRTVKEKATNAAGGAAPRRRNGKVFLDIELNRDFNGDDYDYEDEARL
VLLPQHFEIPLPNIEELPALVTIACDAMLNAPSPYRKPEPLPWDDEIQVSKHSRGLLQQD
SGVRIPPSGWKCSRCEMRENLWLNLTDGAVLCGKWFFDGTGGNGHALEHYRETGFPLAVK
LDTITPDGADVYSFDEEEAVVDPRLADHLAHFGIDVLQKKKKPESGRTGGELQPHLSEWE
LVQESGRKLKAVYGSGYTGIKNLGNSSYLGATMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTRDFHTQMAKLGHALLSGQHSKPPVKSELIEQVVKGDRDAVSRPRPTGVSPRMFKALIG
AEHPEFSSNRQQDALQFLRHLVSIVERNSASPESPADVFRFLVEERTQCCQSGKVRYAQR
PDHIMQLPVPVEAATNREELLEYEVRKREAEENRMPPPPPVRARVPFTVCLQAFTEPENV
PDFWSSALQAKSAGIKTSRFATFPDYLVVQIKKFSFGVDWIPKKLDVSVEMPDFLDLSRL
RGTGLQAGEEVLPDLAPPIITPEDPIGNVNNFLDSPEIDESSVMQLAEMGFPLEACRKAV
YYTGNMGAEMAFSWILAHMEEPDFAEPLAVSGSAQDNPPTRTLASFLASQPPEESVAIVT
SMGFPRQLAIQALQATNNNLERALDWIFTHPDGAVESEQPCDRAEQEEEGESSGDTTHNG
LDFSHGLGSSAPPAERDPPAPRVKDGPGRYELFAFISHMGPSTMSGHYVCHIKKEGRWVI
YNDHKVCLSEKPPKNLGYIYFYQRLSHS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggccatggatttaggagagctcatggtgccctacatgcccaccatccgagtaccgcgg
acgggcgacagagtcttcaagagcgaatgcgccttctcctacgacacacctgagtctgag
ggaggcctctatgtgtgtatgaacacattcctgggcttcgggagggagcacgtggagagg
cactaccgcaagaccgggcagagtgtgtacctgcacctgaagcgcacggttaaagagaaa
gccaccaatgctgcagggggcgccgcgccacgcagacgcaacggaaaggtgttcttagat
atcgaactgaaccgggatttcaatggagatgattacgactacgaggacgaggcccggctc
gtcctattaccgcagcactttgagatcccgttgccgaacatcgaggagttgcctgcgctg
gtgaccatagcgtgtgacgccatgctgaatgcaccatccccctacaggaagccagagcct
ctgccctgggatgacgagatccaagtgtcaaaacactcccggggcctcctgcagcaggac
agcggggtgcggatccccccaagtggctggaagtgctccaggtgtgagatgcgcgagaac
ctctggctgaacctgacggacggagcagtgctttgtgggaaatggttctttgatggcacc
ggaggcaacggccacgcgctggaacactaccgggagactggtttccccctcgccgtaaaa
ctggacaccatcaccccggacggagcagatgtgtactcctttgatgaagaggaggccgtt
gtggacccacgcttggctgatcacttggcacactttggaatagatgtcctgcagaagaag
aagaagcctgagagcggccgcacgggcggcgagctgcagccgcacttgagcgagtgggag
ctcgtccaggagtcgggacgcaagctcaaagcggtgtacggcagcggttacactggcatc
aagaatttgggcaacagcagttacctgggagccaccatgcaggtcctcttcagcatccca
gaattccagagggcgtatgtggggaatttacagaggattttcgactactcgcccctggat
cccacacgggactttcacacacagatggctaagctgggtcacgccttgctctcaggccag
cactcgaagccaccagtgaagtccgagctcatagagcaggtggtgaaaggagaccgcgat
gccgtgtccaggccccggccaacgggggtatcccccaggatgttcaaagccctcatcggc
gccgaacacccggagttttcctcaaaccgacagcaggatgctctccagttcctccgacat
ttggtcagcatcgtagagagaaacagcgcgtccccagagagccctgccgatgtcttccgc
ttcctggtggaggagaggacccagtgctgccagtcggggaaggtgcgctatgcccagagg
cccgaccacatcatgcagctcccggtccccgttgaggccgccaccaaccgagaagagctg
ttagagtatgaagtccggaaaagggaagcagaagagaaccggatgcctccccctcccccg
gtcagagccagggtccccttcacagtttgcttgcaggccttcactgagccagagaatgtg
ccggacttctggagctctgccctgcaggccaagtcggcggggatcaagacaagccgtttt
gccacatttcccgactatttggtggttcagattaagaagttcagttttggtgttgattgg
attcccaagaaattagatgtctccgtggagatgccggacttcctggacctctcacgcctg
cgcggtacagggctgcaagccggagaggaggtgttgcccgacttagctccgcccatcatc
acaccagaggaccccatagggaacgtgaataactttttggactctccggaaatagacgag
tcgtcggtgatgcagctggctgagatgggcttccccctggaggcatgtcggaaggccgtc
tactacacaggaaacatgggcgccgagatggccttcagctggatcctcgcccacatggag
gagcctgacttcgccgaaccactagcagtatctggctctgcccaggacaaccctcccacc
cgcacccttgcctcattcctggccagccagccgccagaggagagcgtggccatcgtgacg
tccatgggcttccccaggcagttggccatccaggcccttcaggctacaaacaacaacctg
gagcgagctctggactggatcttcacccaccctgatggtgcagtggagagtgagcagccc
tgcgacagagctgagcaggaagaggagggggaatccagcggagacaccacccacaatggc
cttgacttctcccacgggcttggcagctccgcaccgcccgctgagcgcgaccccccagcc
cccagggtcaaggatggaccaggccgatatgagctgttcgccttcatcagtcacatggga
ccctcgacaatgtcgggccactacgtgtgtcacattaaaaaggagggaaggtgggtgatc
tacaatgaccataaggtgtgcctgtcagagaaaccgccgaaaaacttgggctacatctac
ttctaccagcggctgtcgcacagttag
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