Scleropages formosus (Asian bonytongue): 108928964
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Entry
108928964 CDS
T04919
Name
(RefSeq) regulator of nonsense transcripts 3A-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
sfm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108928964
03015 mRNA surveillance pathway
108928964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108928964
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108928964
mRNA cycle factors
P-body specific factors
108928964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
108928964
NCBI-ProteinID:
XP_018598695
UniProt:
A0A8C9TXT6
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Position
12:24376173..24382289
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AA seq
487 aa
AA seq
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MKSEKEVVSAARDRRLVEIQFRDLPREQDGVSANPKHKEEKKEVFTKVVIRRLPPSLTKD
QLEEHLSPLPAYDYFEFFSADQSLYPHLFSRAYINFKNPEDIVLFRDRFDGYVFIDNKGQ
EFPAVVEFAPFQKVSKKKVKKKDAKAGSIEEDPEYRRFLENCCDEEKTTANPETLLGEIE
AKTRELIAKRTTPLLEYIKNKKLEKQRIREEKREERRRRELEKKRLREEEKRKRREEERR
KRKEAEKQKKLAEKEIKIKLLKKSDRDDDPDPDRPKDKGDSGDQEKSKWEKVPGHVKSKH
LDKDLKDKSLAESDKEQREHGRRPKDPERHRGRDEERKRQRHHYEFEKLARRKDETKWGK
GYCQDRARREGQHHGYACGSESGDKAGKDERDDLSGRKERIRNKSVLAHQEERTSQSDQI
GGPDQIRGALPAKDRPAMQLYTPGARSRTRMSSAGNGYDCCSNSPERGGDRRYEVTAGTG
SEKSGDE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgagaaggaggtggtgagcgccgccagggaccggcgcctcgtcgagatacag
ttcagagaccttccgagggagcaggacggcgtgtcggcgaaccccaagcacaaggaggag
aagaaggaagtcttcaccaaggtggtcattcggcgactgccgcccagtttgacgaaggac
cagttggaggagcacctcagtccactgcctgcctacgactattttgaattcttctcagcc
gatcaaagtctttatccacacctgttctcccgggcatacattaatttcaaaaacccagag
gatattgttctttttcgagaccgatttgatggctatgttttcattgataacaaaggccaa
gaatttccagcagttgtagagtttgccccatttcagaaagtgtcaaagaagaaagtcaaa
aagaaagatgccaaggctggaagtatcgaggaagaccccgaataccgacggtttctggag
aactgctgtgatgaggaaaaaacgacggccaacccggaaacactgctgggggagatagag
gctaagacccgagagctcattgctaagagaactaccccacttctggagtacataaaaaat
aagaaacttgaaaagcagagaatccgggaagagaagcgagaggagaggaggcgcagggaa
ctagagaagaagcgcctgagggaggaggaaaagaggaaacggcgcgaagaggagaggcgc
aaacgcaaggaggccgagaagcagaagaaactggcagagaaggagatcaagatcaagctg
ctgaagaagtcggacagagatgacgaccccgacccggacagaccgaaggacaaaggggac
agcggggaccaggaaaagagcaagtgggagaaagtcccaggacacgtcaagtcgaaacac
ctggacaaggacttgaaggacaaaagcctggcagagagtgacaaggagcaacgggagcac
gggcggcggccgaaggaccccgagagacaccggggcagagatgaggagcgcaagcgccag
aggcaccactacgagttcgaaaagcttgcgcgccgcaaggacgagaccaagtggggcaag
ggttactgccaggatcgggctcggagagagggccagcaccacggctacgcctgcggctcc
gagtcaggggacaaggcggggaaggacgagagggacgacctgagcgggagaaaagagcgc
atccgcaacaagtctgtgttagcgcatcaggaggaaaggacctcccagtctgaccagata
ggagggccagaccagataagaggggctctgccagctaaggaccgaccagccatgcagctg
tacacacctggcgcacgcagccgcacacgtatgagctcagccggcaacggctacgactgc
tgcagcaactctccagagcgtgggggcgatcgcaggtacgaggtcaccgctgggaccggc
tctgagaaaagtggagatgagtag
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