Scleropages formosus (Asian bonytongue): 108938190
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Entry
108938190 CDS
T04919
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108938190 (ap5b1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
108938190 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
108938190
NCBI-ProteinID:
XP_018614071
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All DBs
Position
2:3399442..3403145
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AA seq
929 aa
AA seq
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MASTNASSWPRRISSFTSSPSQFLSGTTADSFLDQVLHELRDDRISESTKVLLLTPFLEH
PTILCPFPAVGEETAVELLAIFCQVPHKSLQLRCQLLVAITSVLVCTSCVSSEVEVAVGF
LDLLYQTIQDTNDHKNGQQFYYLRLTACDCLREIETCYPGLLSQKLEALYLLKQQETTPL
HQAYSLLYTLALKNAIRLLSLQKGGADDDLKRVLAGNEGFAWKAVETPLPPYPVSSTGQI
SVVQTSTDNKELKSIVSLLLEESYLLTPLSQATLLRELIEVVAMVQALSPAIFKSQLVRL
IGTVEITLLHATLLMKSTFTDSLFTTEDENFFIKRLVSMAQHPLLSVQQKLFYMDCILHF
PENRPISSNGEESLPVLVTPHLAASLLPTVFNDSRTMLCRLSLLSLVYLEADENDDKGVG
YLFSHLMALHRIVENHGTREMTVTYFKSVFTFLTYFYHNEKFTDDLTKSISELYSKHCYL
APNVINLIDRIQEHLEDPKWSIRLLQALQKLIVELPLVQMNIQNLGWHLKILGRVSQESQ
VSQGKTLCFLLSVLINTSLCTTGDWKMGSVVLVVCRNLLQHPSLHRVFTELADLLQYIMQ
HYNDVDIQDHARFYYTLLTNLSREKLSGVLTKGPNVEQTKVRSLSSLMAESEGLSNCLTV
QETTGTVLKLTKVHNTNVHRVSQQTDSEGHEGEDVLTFYRKQFSSPGFSSKVILEYHLTY
AGDVDVTFDKLFSICLHFDLTDSNYEQVSDISVPCLFRNRKPPVVRVTLQPRQPYPSTLC
ASAMFTTDDGLSWHTQLEDIPVCFSDVFLPLPVPVGWSQEKREKLFDHLWSSMCEEEPGQ
SATSLFCFEIGNQELPALIESNFSAYLISQEPEKQSYKVMFFLPPQFHVLLTIANAEDAV
QVRIATDNWDFLPFINTYLKSVAPQTPRS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacgaacgcgagctcgtggccccgcagaatctcgagcttcacgagcagcccg
agtcagttcctgtccggcaccacagccgacagcttcctggaccaagtgctgcacgagctg
cgggatgacaggatcagcgagagcaccaaggtcctccttttgaccccttttttggagcac
ccaaccatcctgtgcccgttccccgccgtgggcgaggaaacggccgtggagctcctggcc
atcttctgccaggtccctcacaagtccctccagctcaggtgccagctgttggtggcgatt
accagcgtcctggtgtgcacatcctgtgtgagtagcgaggtggaggtggctgtaggtttt
ttagacctcttgtatcagaccatccaagacaccaacgatcacaaaaatgggcagcagttc
tactatctcaggctgactgcctgcgactgcctgcgggaaatcgagacttgttacccaggg
ttgctctctcaaaagcttgaggctctttaccttttaaagcaacaggagactacgccgctc
caccaagcgtactctctactctatacattggcacttaagaacgctattcgcctcctgtct
ttgcaaaaaggaggagctgatgatgacttgaagagggttttggctgggaatgaggggttt
gcatggaaagctgtagaaacccccttgcctccatacccagtgagctctaccggacagatc
tcagtggtgcagacaagcaccgacaataaagagctaaagtcaatagtctctttgctgctg
gaggagtcctaccttctgacgcctctttcccaggctaccctgctgcgagaacttattgaa
gtggtggccatggtccaagccctctccccagccattttcaagtctcagcttgtgcgtctc
attggaactgtggagatcacactgctgcatgccacgctgctaatgaaaagcaccttcacg
gacagcctgttcactactgaggatgagaatttcttcattaaacgtcttgtgagtatggct
cagcatccacttctgagtgtccagcagaagctcttctacatggactgcattctccatttc
ccagagaatcgacccatctccagtaatggagaggaaagcctgccagtgcttgtaacgcct
catctggccgcctccctgcttcccacggtctttaatgacagcaggaccatgctttgccga
ctgagtctcctcagcttggtgtacttggaagcagatgagaacgatgacaaaggagtcggc
tatttgttcagtcatctaatggctctgcatagaattgtagaaaatcatggcacaagagag
atgacagttacatattttaaatcagttttcacatttctcacttatttttaccacaatgaa
aaattcacagatgacttgacaaaaagcatcagtgagctttattcaaagcactgttacctt
gcaccaaacgtgatcaatctcattgatcggattcaggagcatttggaagatccaaaatgg
tcaatccggttactgcaagctttacagaaattaattgtggaattgcccctagtccaaatg
aatattcagaatctggggtggcatcttaaaatcctgggccgggtgtctcaggaaagccag
gtttcacaggggaaaactttgtgttttctgctcagtgttcttattaataccagcctgtgc
acaactggggactggaagatgggaagtgtggttctcgtcgtttgtcgaaaccttcttcag
catcccagcttgcatcgggtgttcactgagctggctgaccttctgcagtacataatgcag
cactacaacgatgtggacattcaagaccacgcaagattctattacacgttgctgaccaac
ctatctcgagaaaagctctctggggtccttacaaagggaccaaatgtggaacagaccaag
gtacggtccctgtcctctctcatggcagagagtgaagggctatccaactgcttgactgta
caagaaaccacaggtacggtgctaaaactcacgaaggtccacaataccaacgtgcacaga
gtttcacagcagactgactcagagggccacgaaggtgaggatgtgctgacattttatcgc
aagcagttttcaagtccaggattttcctctaaggtgatcttggaataccacctaacgtat
gcaggtgatgtagatgttacgttcgacaagctcttcagcatctgcttgcactttgacctg
acagactccaattatgaacaagtgagtgacatcagcgttccatgtttgttcaggaacaga
aagccccccgtagtacgtgtcactctgcaaccacggcagccgtacccctccactctttgt
gccagtgccatgtttaccacggacgacggactttcctggcatactcagctggaagatata
ccagtgtgcttctcagatgtattcctgcccttgcctgttccagtgggctggtctcaggag
aaaagagaaaagctctttgaccatctttggagctccatgtgtgaagaagagcctggccag
tcagccactagtttgttttgttttgaaattggaaatcaggaactccctgctcttattgag
tcaaactttagtgcctatcttatctcccaggagcctgagaaacagtcttacaaggtcatg
ttcttcctcccaccccagtttcatgtcttgctcaccattgcaaatgcagaagatgctgtt
caagtgagaatcgccactgacaactgggattttttgcctttcatcaatacttaccttaaa
agtgttgcacctcagacaccaagaagctga
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