Scleropages formosus (Asian bonytongue): 108938969
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Entry
108938969 CDS
T04919
Symbol
gtf2h2c
Name
(RefSeq) general transcription factor IIH subunit 2-like protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
sfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108938969 (gtf2h2c)
09124 Replication and repair
03420 Nucleotide excision repair
108938969 (gtf2h2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108938969 (gtf2h2c)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108938969 (gtf2h2c)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108938969 (gtf2h2c)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108938969 (gtf2h2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HMBD
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
108938969
NCBI-ProteinID:
XP_018615515
LinkDB
All DBs
Position
17:complement(3802450..3810626)
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKATVEDILFKDKRKRVFENYGQVRLGMMRH
LFVVIDTSRTMEDQDLKPNRLTSTLKLMEYFVDEYFDQNPISQIGIIITKNKRAEKLTDL
AGNPQKHISALKKAVDTTCAGEPSLYNSLNLAMHTLKHMPGHTSREVLVIFSSLTTCDPS
NIYDLIKTLKGLKIRVSVIGLSAEVRVCTILTRETGGTYHVILDETHFRELLTFHVKPPP
ASSSSECSLIRMGFPQHAIASVSDQDSKPSFSMSHLDNSSGPGLTLGGYYCPQCRAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPMDAFQEMPLEEFEGERFCEACQGELKDKSVFIC
SVCSSAFCVECDLFIHDTLHCCPSCIHSQSTS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacccgaacggaccaaacggtgggaaggtggctatgaaagaacatgggag
gtgctcaaagaagatgagtctgggtcacttaaggcgacagtagaggacatcctgttcaag
gacaagaggaagagagtgtttgagaactatggacaagtacgactgggaatgatgcgccac
ttatttgtggtgattgacacctccaggacaatggaagaccaagaccttaagcctaataga
ctgacatcaactcttaagttgatggaatactttgtggatgagtactttgaccagaacccc
atcagtcagatagggatcatcatcaccaagaacaagagagcagagaaacttacagaccta
gctggaaaccctcagaagcacattagtgccctcaagaaagctgtggacacaacttgtgcc
ggggagccctcgttgtacaactctctgaacctggccatgcacacactcaaacacatgcct
ggtcataccagccgggaggtccttgtgattttcagcagccttaccacctgtgatccttcc
aacatctatgacttaattaagactctgaaggggctgaagattcgagtgtctgtgattggg
ctgtcagcagaggtgcgagtgtgtaccatcctgacacgagagacgggcggaacttaccac
gtcattctggacgagacgcatttccgtgagctgctgacattccatgttaagcctcctccc
gcgagctcctcttcagagtgttccctcattcgcatgggattccctcaacacgccattgcc
tcagtgtctgatcaggactctaagccttcctttagcatgtcacacttggacaacagtagt
ggtcctggtttgaccctcggaggatactactgcccgcagtgtcgagccaagtacacagag
cttccagtggagtgcaaagtgtgcggcctcacgctagtttcagctcctcacttggccagg
tcgttccatcacctcttccccatggatgcctttcaggagatgccactggaggagtttgaa
ggagagcggttttgtgaagcttgtcaaggggaactcaaagacaaaagtgtcttcatctgc
tcggtgtgcagcagtgcattctgtgtggagtgtgacctcttcatccatgacacgctgcac
tgctgtccctcatgcatacatagccaaagtacttcctga
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integrated database retrieval system
