Scleropages formosus (Asian bonytongue): 108940251
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Entry
108940251 CDS
T04919
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108940251 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108940251 (mbd4)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108940251 (mbd4)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
108940251 (mbd4)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108940251 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
108940251
NCBI-ProteinID:
XP_018617767
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All DBs
Position
2:complement(33466386..33470824)
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AA seq
470 aa
AA seq
DB search
MKTEEQSGRNPEQQPAKRCPPTTSMPEGWTKVVKQRKTGKTAGKLDVYIKSPQGRTFRSK
AALQVFLQSNEDLGVRVEDFDFTAAGSHAMVSQPERKARRLMCLTDADVTAARTLPTSVK
EEQEAAGIAILPPATSKTTRPKSRAGTRGKAQSNPLLVKQELSDHGLERVGEPSGADSTG
RKEECLSVTPEVREVTILPADIPAKGFQKTVLLRDKLLSKIKLEGSPHTDAQKDQSKLVS
PKGLPASSIGEPASTSHDTDAAIVSPSGLREGLLPASQSLGGSLSPRNQPQSSPRPKAEM
ERKKISPYFSGKSMKEAPSPPRRKAFKKWTPPRSPFCLVQETLFHDPWKLLVATIFLNKT
NGKMAIPVLWQFFERYPTPEVTRESDWLPLAELLRPLGLHELRAKSIIRFSDEYLTKQWR
YPIELHGIGKYGNDSYRIFCVEEWKQVKPKDHKLNKYHAWLWQNHEKLGI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagaggaacagtccggccggaaccctgagcagcagcctgcgaagagatgcccc
cccaccaccagcatgccggagggctggacaaaggtggtcaaacagaggaaaacgggaaag
acggcaggaaagctggacgtttacattaaaagtccccagggacgaactttcaggtcaaag
gcggcactccaagtcttccttcaaagcaacgaagatttgggcgttcgggtcgaagacttt
gacttcactgcagcaggaagccacgcaatggtgtcccagcctgagaggaaagcgaggcgt
ctgatgtgtttaacagacgcagatgtgacagctgctcgaactttaccaacctccgtcaag
gaagagcaggaagcagctggcattgccatccttcctccggcgacctccaagaccacgagg
ccaaagtcaagagccggaacaagaggcaaagcacagagcaacccgttgctcgtaaagcag
gagctgtccgaccacggtcttgagagggtgggagagcccagcggagctgacagcacaggc
aggaaagaggagtgtcttagtgtgaccccagaggtcagggaggtcaccatcctgccagca
gatatccctgccaaaggcttccagaagacagtgctcttgagggacaagctgcttagtaag
atcaagttggaaggcagtccacataccgatgctcagaaggatcagtcaaaactggtttct
cccaaaggacttcctgcttcaagtattggagagcctgcaagcacgagtcatgatacagat
gcagccattgtgtctccatcaggactacgagaaggcctgttgccagcctctcagagcctc
ggggggagtttgtcaccaaggaaccagccgcagagcagccctagaccaaaagctgaaatg
gagagaaagaaaataagcccttacttcagcgggaagtccatgaaagaggctcccagcccc
ccaaggcgcaaggcctttaagaagtggacgccacctcgatcacccttctgtctagttcag
gagaccctcttccatgacccctggaagctgctggttgctaccatttttctcaataagacc
aatggtaagatggccatcccagttctttggcagttttttgaacgctaccccacacctgaa
gttacccgtgagagcgactggttgcccctggctgaactgctcagacccctgggcttgcat
gagctgagagccaaaagcatcatcagattttctgacgaatacctgaccaagcagtggcgc
taccctatcgagctccacggcattgggaagtacggcaatgactcgtacagaattttctgt
gtggaggaatggaagcaggtaaagcctaaggatcacaagttaaataagtaccatgcttgg
ctatggcagaatcatgagaaactggggatttaa
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