Scleropages formosus (Asian bonytongue): 108941544
Help
Entry
108941544 CDS
T04919
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108941544 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sfm04054
]
108941544 (dhx58)
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108941544 (dhx58)
Pattern recognition receptors [BR:
sfm04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
108941544 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
cobW
Motif
Other DBs
NCBI-GeneID:
108941544
NCBI-ProteinID:
XP_018619809
LinkDB
All DBs
Position
8:29882670..29890230
Genome browser
AA seq
678 aa
AA seq
DB search
MEEIRLYRYQEEVVRPALEGKNIIIWLPTGGGKTRAAVYVTKRHLETKPGAKVAVLVNKV
HLVDQHYTKEFSPFLGRDYRVVSISGDSSQKDFFGSVVQDNDVVICTAQILENAMENKEE
GKHVKLTDFTLLIFDECHHTHKESVYNKIMGHYVERRLARDRDLPQVLGLTASPGTGGAK
TLEKAKEHVLQICANLDASAITSSREHAEELRQKVPRPRKEYDIVEQRVEDPFGDHLKWM
MKRIHAFMDMEDNCKPFGTQEYEAEVVLLEKRGVMETNRLLAQCALHLRKYNDALLVNDT
VRMVDALRLLDNFYSNHRESRTGLDGTDVFLFGLFEENKTELKTLAAMSRYENPKLAKLE
STLLKQFGTQGMSRGILFCKTRVSTHYLYDWVLASRVLQKAGVKAAILTGAGNQANHMTQ
NDQKRTIQRFREGVLNLLVSTSVAEEGLDIPECNLVVRYGLLTNEIAMQQASGRARAENS
VYSVVALKDGREQRREKTNEYLEELTRQAVSEVQRMAPRDFQLKIRELQRDALVTRRLAE
LRLQDRRRRYPSASVTLSCRTCNIAVACGSDIQVIENTHYVNINPNFKMYYRTGGQVQLT
KTFEDWTPGRKISCADCGKEWGMEMIYKNVTLPNLAIKSFALATPDSREPVKKWKDVQFA
IEEFDYSEYCLKKFPDLL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaggagattcgcctgtaccggtaccaggaagaagtggttcgaccagctctggagggc
aagaacatcattatatggctgccgacgggaggggggaagacccgtgctgcggtttacgtg
accaagaggcacctggagactaagcccggggccaaggtggcggttctagtgaacaaggtt
catctggtggaccagcactatacgaaggagttcagccccttcctcgggagggactacaga
gttgtgtccatcagcggtgactccagccagaaggacttctttggttcggtagttcaggac
aatgacgtggtcatctgcaccgcccagatcctggagaatgccatggagaacaaggaggag
gggaagcatgtcaagctcacagacttcaccttgctcatctttgatgagtgtcaccacacg
cacaaggaaagtgtttacaacaagatcatgggccactacgtggagcgaaggctggcaagg
gacagggacctgccacaggttttgggcctcacagcctcccctggaactgggggagccaag
acgctggagaaggccaaggagcacgtcctgcagatctgcgccaacctcgatgcctcggcg
atcacgtcctcccgggaacatgccgaggagctgaggcagaaagtgccgaggcccaggaag
gagtatgacatcgtggagcagagagtggaggatccctttggagatcatctgaagtggatg
atgaaacggattcacgccttcatggacatggaggataactgcaaaccctttggcacgcag
gagtacgaggcagaggtggtgcttttggagaagagaggggtgatggagacgaaccggctg
ctggcccagtgcgcgctgcacctgcggaagtacaacgatgctctgctggtcaacgacacc
gtgcgcatggtggatgccctcaggctcctggacaacttctacagcaaccacagggagagc
cgcaccggcctggacggcactgacgtcttcctctttgggctgtttgaggagaacaagact
gagctgaagacgctggcagccatgtccaggtacgagaaccctaagctggccaagctggag
agcaccctcctgaagcagtttggaacgcagggcatgtctcgggggatcctgttctgcaag
acgcgcgtgagcacccattacctgtacgactgggtgttggccagccgcgtgctgcagaag
gccggcgtcaaggctgccattctcaccggtgcgggcaaccaggccaaccacatgacccag
aacgaccagaagcggaccatccagaggttccgcgagggtgtcctgaacctgctcgtctca
accagcgtggccgaggagggcctggacatcccagagtgcaacctggtggtgcgctacggt
ctgctgaccaacgagatcgccatgcagcaggccagcggccgggcccgggccgagaacagc
gtctattcggtggtggccttgaaggatggacgcgagcagcgccgggagaagaccaacgag
tacctggaggagttgacgcgccaggcagtcagcgaagtgcagcgcatggcgccgcgggat
ttccagctcaaaatccgggagctgcagagggacgctctggtcacccgccggctggctgag
ctgcggttgcaggacaggcggaggcgctacccctctgcgagcgtcacgctcagctgtcgc
acctgcaacatcgccgttgcctgcggcagcgacatccaggtcatcgagaacacgcactac
gtcaacatcaaccccaacttcaagatgtactaccggactggcggtcaggtgcaactgacc
aagacgttcgaggattggactccgggccgtaaaatcagctgcgccgattgcgggaaggag
tggggaatggaaatgatctacaaaaacgtcactctgccgaacctggccattaagagcttt
gccctggcgacgccagacagcagggagcccgtgaagaagtggaaagacgtacagttcgcc
atcgaggagttcgactactccgagtactgcctcaaaaagttccccgacctcctgtaa
DBGET
integrated database retrieval system
