Shewanella frigidimarina: Sfri_0008
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Entry
Sfri_0008 CDS
T00395
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sfri_0008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfr03400
]
Sfri_0008
Enzymes [BR:
sfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Sfri_0008
DNA repair and recombination proteins [BR:
sfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sfri_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
ABI69871
UniProt:
Q08A44
LinkDB
All DBs
Position
10534..11097
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AA seq
187 aa
AA seq
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MQVNRCGWVSEDPLYQHYHDTVWGRPEFDAKQLFAKLCLDGQQAGLSWITILKKQQNYQQ
LFANFEPSIIAQYDQAKVEALMLEPGIVRNRLKINSIIRNAKAYLAFVEQGDDFSKFLWG
FVGGEPRANNFSSSSQVPAQTAESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHTTD
CHCHGQY
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttaaccgatgtggctgggtaagtgaagaccctttatatcagcattaccacgat
acagtatggggacgtccagagttcgatgccaaacagctttttgctaagttgtgtcttgat
ggtcaacaagctggattatcttggattacgattcttaaaaagcaacaaaactaccagcaa
ctgtttgctaattttgagccgagtattattgcacagtacgatcaagctaaagtggaagcg
ttaatgctagaaccgggtattgtacgcaatcgtcttaaaataaactcgatcatcagaaat
gctaaagcttatttagcctttgttgagcagggtgatgatttctctaagtttttatgggga
tttgttggtggtgaaccgagagcaaacaacttcagttcatcaagccaagttcctgcacaa
acggcagaatctgaagctatgtctaaggcattaaaaaagcttggttttaattttgttggc
ccaacaatttgttatgcttttatgcaagcggttggaatggtaaacgatcatacgacagat
tgtcattgtcacggtcagtattga
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