Shewanella frigidimarina: Sfri_2643
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Entry
Sfri_2643 CDS
T00395
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K24264
aspartate 1-decarboxylase [EC:
4.1.1.11
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00770
Pantothenate and CoA biosynthesis
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
Sfri_2643
Enzymes [BR:
sfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.11 aspartate 1-decarboxylase
Sfri_2643
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Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
P53_tetramer
Motif
Other DBs
NCBI-ProteinID:
ABI72484
UniProt:
Q07ZT1
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Position
3167455..3169095
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AA seq
546 aa
AA seq
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MTSKITRQANASEDSLLRIFTAPEDSTSTLSIIEQKLSQDLAGFLGNSIAALEKPLSEIE
TDFSAYQIPTEPKFVSDYADEIMQNLVAHSVHTSAPSFIGHMTSALPYFVLPLSKMMVGL
NQNLVKIETSKAFTPLERQVLGMMHNLVYQQSDDFYHQWMHSANHSLGAFCSGGTVANIT
ALWIARNRLLQPRGDFKGVTREGMTKALRFYGYDDLAILVSDRGHYSLGKTADLLGIGRD
NIISIPTDEHHKVDVAAMRDAAEKLAQQNIKVMAIVGIAGTTETGNVDPLTELAALASEL
NCHFHVDAAWGGASLLSKKYSHLLKGIELADSVTIDAHKQMYVPMGAGMVLFKDPELAKA
IVHHAEYILRVGSKDLGSQTLEGSRPGMAMLVHACLQIIGRDGYEILINNSLEKARYFGS
IIDQHADFELVTAPELCLLTYRYVPKSVQAILTTALANQDSALVASINELLDGLTQFIQK
HQREQGKSFVSRTRIKPAKYLRQPTTVFRVVLANPLTSHQILHDVLTEQVEIAALDSEYL
PQLLAL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgaaaatcacccgtcaagcaaacgcttcagaagacagtttactgcgtattttt
accgcccctgaagattcaacctcgacgttgagcattattgagcaaaagctatctcaagac
ctcgcgggttttttaggtaatagcatcgccgcactggaaaaaccactgtcagaaattgaa
accgactttagcgcctatcagatcccaacagaacccaagttcgtttctgattatgccgac
gaaataatgcaaaacctagtcgctcattcagtccatacttcagcacccagttttattgga
cacatgacctcggccttgccttattttgtgttaccactgtcaaaaatgatggtcgggcta
aaccaaaatttagtcaaaattgaaacatccaaagcctttactccattagaacgccaagtg
ttaggcatgatgcataatttggtgtatcagcaatctgatgatttctatcatcaatggatg
cacagcgctaaccactcactcggggcattttgctcaggtggcaccgttgctaatatcacc
gcactgtggattgcccgaaaccggctgctacaaccacgcggcgattttaaaggcgtcacc
cgcgaaggaatgacgaaagcattgcgcttttatggctatgatgaccttgctattttagtg
tcagatcgcggtcattactctttgggtaaaactgccgacttgctgggtattggccgagat
aacatcattagcatcccaacagatgaacatcataaagtcgatgttgccgccatgcgagat
gcagcagaaaagctggcacaacaaaatattaaagtgatggccattgtcggtatcgctggc
acaacagaaacaggcaatgtggatcccttaactgaattagcagcgttagccagcgagcta
aattgccattttcatgtcgacgctgcctggggcggcgcgagtttattatctaaaaaatat
agccacttattgaaaggcatcgaattagctgactccgtcactatcgatgctcataagcaa
atgtatgttccaatgggcgctggtatggtgctatttaaagatcctgaactggctaaagcc
atagtgcaccatgctgaatatattctacgggtaggttcaaaagacttaggcagtcaaacg
ctggaaggttcgcgcccagggatggcaatgctagtgcatgcttgtcttcagattattggc
cgtgatggctatgaaattctcattaataacagcctagaaaaagcccgttactttggatca
atcatcgaccaacatgctgactttgagttagtcacagcaccggagttatgtttactgacc
tatcgctatgtaccaaaatcggtgcaagctatactcactacagctctagccaaccaagac
agcgctttagttgcatcaatcaatgaactactcgatggactgacacaatttattcaaaag
catcaacgcgaacaaggtaaatcgtttgtgtcacgcacacgtattaaaccggcaaaatac
ttacgccaaccaacgacagtatttcgtgtggtactggccaatccgttgaccagtcatcaa
atattgcatgatgtactgacagaacaagttgagatagccgcattagacagcgaatactta
ccccagttgttggcgttgtag
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