Shewanella frigidimarina: Sfri_2827
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Entry
Sfri_2827 CDS
T00395
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00521
Streptomycin biosynthesis
sfr00523
Polyketide sugar unit biosynthesis
sfr00541
O-Antigen nucleotide sugar biosynthesis
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr01250
Biosynthesis of nucleotide sugars
Module
sfr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Sfri_2827
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Sfri_2827
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Sfri_2827
Enzymes [BR:
sfr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Sfri_2827
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABI72666
UniProt:
Q07Z98
LinkDB
All DBs
Position
complement(3408967..3409515)
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AA seq
182 aa
AA seq
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MKVIDTIIADVKIIEPAVFGDERGFFMETWSQQKFEELVTGKPTKFVQDNHSKSKKGILR
GLHYQTKNTQGKLVRVVSGEVFDVAVDIRKGSPTFGQWVGVYLSAENKRQLWVPEGFAHG
FYVTSEEAEFVYKCTDYYNPKAELSIAWNDSDIGIKWPISNTPLLSEKDKFGIKIIDMVG
LI
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcattgatacaatcattgcggacgttaaaatcatcgaaccagcagtctttggg
gatgaacggggtttctttatggaaacgtggagtcagcaaaaatttgaagaacttgtaacg
ggtaaacctacaaagtttgttcaggataatcactctaaatccaagaaagggattttacgt
ggtttgcattatcagactaaaaatacccaaggtaaattagtacgtgtggtgtctggtgaa
gtatttgatgttgctgttgatataagaaaggggtctcctacatttggccaatgggtcggt
gtgtatttatctgcagaaaataaacgtcagttatgggtgcctgaaggttttgcccatggt
ttctatgtaacgagcgaagaagctgaatttgtatataagtgtactgattattataatcct
aaggctgaactatccattgcctggaatgacagtgatataggtattaaatggccaattagt
aatacaccactattatctgaaaaagataagtttggaataaaaatcatagatatggttggt
ttaatatga
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