KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_1673
Entry
SFyv_1673         CDS       T03315                                 
Name
(GenBank) YcfD
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sfs03009]
    SFyv_1673
Enzymes [BR:sfs01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     SFyv_1673
Ribosome biogenesis [BR:sfs03009]
 Prokaryotic type
  ribosomal protein modification factors
   SFyv_1673
SSDB
Motif
Pfam: JmjC_2 ROXA-like_wH Cupin_1 Cupin_2 AraC_binding Tup_N
Other DBs
NCBI-ProteinID: AIL40135
LinkDB
Position
complement(1216124..1217245)
AA seq 373 aa
MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGK
WQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILY
IPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPA
DVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQG
DVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAML
AALVNSGYWFFEG
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggaataccaactcactcttaactggcccgattttcttgaacgtcactggcagaaacgc
ccggtggtgttaaaacgcggctttaataattttattgacccgatctctccagacgagttg
gcgggtctggcgatggaaagcgaagttgacagtcgactggtcagtcaccaggatggcaaa
tggcaggtcagccacggcccgttcgaaagctacgatcatctcggtgaaaccaactggtca
ttactggtacaggcagtaaaccactggcatgagccgaccgccgcgctgatgcgaccgttc
cgtgaactaccggactggcgtattgatgatctgatgatttctttttctgtacctggcggc
ggcgtcggcccgcatctcgatcagtacgacgtgtttatcattcagggtaccggacgtcgt
cgctggcgagtgggcgaaaagctgcaaatgaaacagcactgcccacatccggatctgtta
caggtcgatccgttcgaagccatcatcgatgaagagctggagcctggtgatattctttat
attccgccaggattcccgcatgaaggctacgcgctggaaaatgcgatgaactattccgtg
ggttttcgcgcgccaaatacgcgggaattaattagcggatttgccgattatgtgctgcaa
cgtgaactgggcggcaactactacagcgatccggatgttccacctcgtgctcatcctgcg
gatgttctgccgcaagagatggataaactgcgtgagatgatgctcgaattgatcaaccag
ccggaacactttaagcaatggtttggcgagtttatatcccagtcacgtcatgaactggat
atcgcgccgccggaaccgccttatcagccagatgaaatctacgatgcgctgaaacaaggt
gatgtgctggtgcgcctgggtggtctgcgcgtattgcgcattggcgacgacgtgtatgcc
aatggtgagaagatcgattccccgcaccgtccggcactggatgcactcgccagcaacatt
gcgctgactgcggagaattttggcgatgcgctggaagatccgtcattcctcgcgatgctc
gcggcgctggtcaatagcgggtattggttcttcgaagggtaa

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