KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_6142
Entry
SFyv_6142         CDS       T03315                                 
Name
(GenBank) HolC
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs03030  DNA replication
sfs03430  Mismatch repair
sfs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SFyv_6142
   03430 Mismatch repair
    SFyv_6142
   03440 Homologous recombination
    SFyv_6142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sfs03032]
    SFyv_6142
   03400 DNA repair and recombination proteins [BR:sfs03400]
    SFyv_6142
Enzymes [BR:sfs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SFyv_6142
DNA replication proteins [BR:sfs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SFyv_6142
DNA repair and recombination proteins [BR:sfs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SFyv_6142
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AIL43555
LinkDB
Position
4416975..4417457
AA seq 160 aa
MQQYLNPPQEAPYMKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEK
QAYRLDEALWARPAESFVPHNLAGEGPRGSAPVEIAWPQKRSSSPRDILISLRTSFADFA
TAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
NT seq 483 nt   +upstreamnt  +downstreamnt
atgcagcaatatttaaatccaccacaagaagccccatatatgaaaaacgcaacgttctac
cttctggacaatgacaccaccgtcgatggcttaagcgccgttgagcaactggtgtgtgaa
attgccgcagaacgttggcgcagcggtaagcgcgtactcatcgcctgtgaagatgaaaag
caggcttaccggctggatgaagccctgtgggcgcgtccggcagaaagctttgttccgcat
aatttagcgggagaaggaccgcgcggcagtgcgccggtggagatcgcctggccgcaaaaa
cgcagcagcagcccgcgcgatatattgattagtctgcgaacaagctttgcagattttgcc
accgctttcacagaagtggtagacttcgttccttatgaagattctctgaaacaactggcg
cgcgaacgctataaagcctaccgcgtggctggtttcaacctgaatacggcaacctggaaa
taa

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