Syntrophobacter fumaroxidans: Sfum_1438
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Entry
Sfum_1438 CDS
T00418
Name
(GenBank) type III restriction enzyme, res subunit
Organism
sfu
Syntrophobacter fumaroxidans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
HIT
Helicase_C
DcpS_C
DEAD
PLDc_2
SWI2_SNF2
HNH_repeat
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
ABK17129
UniProt:
A0LI77
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All DBs
Position
complement(1782620..1785853)
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AA seq
1077 aa
AA seq
DB search
MTEKSCPFCSPDDHRVFYEGKLVFALWDGFPVAPGHALLVPKRHVATWFDATPEEREELL
AATEVVRDHILSHFEPAGFNLGINIGTAAGQTVFHLHLHVIPRYHGDVEDPTGGVRNVIP
AKANYLKRPVVEMDAIAKSAHRGITGPFLDLGRSEHLVSGGDDPLLPHLQTHLDVSERAD
MAVAFILESGIDLLEEHLQSLLDRGGRVRLLTGDYLGITDPIALSRLLDLCEGATGQFEL
RVFESRGVSFHPKAYIFYIDTVPGGGVAYVGSSNLSGQALAEGIEWNYRIVPAESHKGFR
AVTAAFETLFCHARTRPVDHVWIRQYQESRRPPCINVPPSNQGEVILEEAQRNWGRLPVS
VPAEIVPEDAKPSPEPHRIQREALEALARTRAEGNQAGLVVLATGLGKTWLAAFDSVRFG
AGKVLFVAHREEILRQALKTFRRIRPFAALGLYNGTEKLPGADVLFASIQTLGRTNHLRS
FDRNLFDYVVIDEFHHASARSYQKLIDHFQPAFLLGLTATPERTDGGDLLALCAENLVYR
CDLVEGIRDGLLCPFRYFGVPDEVDYSNIPWRSGRFNEEALTRAVATKRRAVNALEQYRS
RAGRRTLAFCCSQRHADFMADYFTNQGVRAASVHSGPQTAPRGGTLKRLTDGELDVIFAV
DMFNEGVDLPNVDTVMMLRPTESRILWLQQFGRGLRVAEGKDYLRVIDYIGNHRSFLLKP
RTLLGLGRGDNELSMALEAVQNGTFDLPPGCEVTYELEAVDVLRALIKMPPAHEALRFWY
EDFKENNDRRPTAVEAFHEGYNPRSARKNYGSWFRFLAAMGDLSADERNVLENSRAGDFL
DILETTPMSRSFKMLTLMAMLNEGQLPGQIKVERLVEGFAQLALRSATLRTDVGVDLQDR
AALRRYLERNPIEAWTGGRGTKRKSFFSYRDGVFGATFTLEDAIRAAFHELAREIIDWRL
AEYLQRPSLSNPVTSDILCRVSHASGRPILFLPDRKIHPRIPLGWTEVLVEGEPCEANFV
KVAVNVLRRRDSAKNVLSEILRRWFGSDAGRPGTNFQVVFRESDGSLILEPIESERF
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaaatcgtgtccattctgttctcccgatgatcatcgcgtgttctacgagggc
aagctggtatttgcactgtgggatggcttcccggttgctccggggcatgcgctcctcgtt
cccaaacggcatgtggcaacctggttcgacgcaacccctgaagagcgggaggaactcctg
gctgctaccgaggtggttcgagaccacatcctctcccacttcgagccggctggcttcaac
ctgggaatcaatatcggcacggcagccggtcaaaccgttttccatcttcacctgcatgtg
atcccaagataccacggcgacgttgaggaccccaccgggggtgttcgcaatgtcatcccg
gcaaaggcaaactacctgaaaagacccgtcgtggagatggatgccattgcgaagagtgct
caccgggggataaccggcccgtttctcgacttgggtcgatcagagcatttggtttctggt
ggagatgacccattgctgcctcatctccagacccacctcgatgtctccgaacgtgcggat
atggccgtagctttcattctcgaaagcggcatagaccttctcgaggaacacctgcagtcg
cttctggatcgcggggggcgagttcggcttcttaccggggactacctgggaatcaccgac
cccatcgcgttgtcccggctcctggatctgtgcgaaggggctacaggccaattcgaactc
cgggtcttcgaaagtaggggtgtcagctttcaccccaaagcctatattttttacatcgac
actgtaccagggggtggcgttgcatatgttgggagctccaacctgagcgggcaggcgctt
gcggagggtattgaatggaactaccgcatagtccctgccgaaagtcacaaaggattccgg
gcggtcaccgccgccttcgaaacactgttttgccacgcacgaaccaggcccgtcgaccat
gtgtggatccgacaataccaggaatcgcgaaggccgccctgcatcaacgtgccgccctcg
aaccagggcgaggtcattttggaagaggcccagaggaactggggaaggctccccgtttcg
gtgccggctgaaattgtccccgaggatgccaaaccttcgcctgaaccccacagaattcaa
agggaggctctcgaagcgctggcgaggacccgtgccgaaggcaaccaggccgggctcgtg
gtcctggcgactggccttgggaaaacgtggctcgcagccttcgacagcgttcggtttggt
gccgggaaagtgttgtttgttgcccatcgggaggaaatccttcggcaggcgctgaagacg
ttccgccggattcgaccgtttgccgcccttgggctttacaacggcacggaaaagctgcct
ggcgcggatgtgcttttcgcctcgatccagacgttggggcgcaccaatcatctccggtct
tttgaccgtaatctgttcgactacgttgtgatcgacgaattccaccatgcctctgcccgg
agctatcaaaagctgatcgaccactttcagccggctttccttcttgggcttaccgcaacg
ccggaaaggactgacggcggggacctcctggcgctctgcgcagagaatctcgtataccgc
tgcgatcttgttgagggaatccgcgacgggctcctctgcccttttcggtacttcggtgtc
ccggatgaagtggactacagcaacattccgtggcgtagcggtcgctttaacgaggaagct
ctgacccgggccgtggccaccaaaaggcgtgccgtgaacgccctcgagcagtaccggagc
cgtgccggcaggcgcaccctcgccttctgctgctcccagcgtcacgccgatttcatggcg
gattatttcaccaatcagggggttcgggccgcttccgttcactccggaccgcagacggcg
ccgagaggaggtaccctcaagcgccttaccgacggtgaactcgatgtgatattcgctgtc
gacatgttcaatgagggtgtcgacctccctaatgtggacaccgtcatgatgctccggcca
acggaatctcgaatcctgtggctccagcagttcggtcgcgggcttcgagttgccgagggt
aaggactacctccgtgtcatcgactacatcggcaatcaccgatcctttctgctcaagccc
cggacgctgctgggtcttgggaggggtgacaatgaactttcgatggcgctggaggcagtc
caaaatggaacattcgatcttccaccgggatgcgaggtcacctatgaactggaagccgta
gacgtcctgcgggcgctcatcaagatgccgccggcgcacgaagctctgcgattctggtat
gaggactttaaagagaacaacgacaggcggccgacagctgtcgaggcctttcacgaaggc
tacaacccccgctctgccaggaagaactatggctcttggtttcggtttctcgctgcaatg
ggcgatctttcggcagacgaacgcaatgtgttggagaattctcgggcaggagacttcctc
gatatcctggaaaccacccccatgtccaggagcttcaagatgctcacgctcatggccatg
ttgaacgaggggcagttgcccgggcaaatcaaggttgaaaggcttgtggaaggcttcgca
cagctggcccttcgctcggcgacactcagaactgatgtcggagtggacctccaggaccga
gcagcccttcgccgatacctggagaggaatcccatcgaggcatggaccggagggaggggc
accaagcgtaagtctttcttttcctaccgtgacggagttttcggggccacttttacgtta
gaggatgctattcgcgccgcgtttcatgaacttgcacgggaaatcatagactggaggctg
gccgaatacctccagcgaccttctctgagcaaccccgtgacgagcgatatcctatgcagg
gtcagtcacgcaagtgggcggccgattctgtttcttccagacagaaagatccatccacgc
attccgctcggatggacagaagtgcttgtggaaggggagccttgtgaagccaactttgtc
aaggttgcggtcaatgtgttacgtcgaagagactcggcaaaaaacgtcctttcagagata
ctgaggcgatggtttggttccgacgctggtcgccccggcaccaattttcaagtcgtgttc
cgagagtcggatggaagcctgattcttgaacccatcgagtcggagcgcttttga
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