Streptomyces fungicidicus: CNQ36_16120
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Entry
CNQ36_16120 CDS
T07133
Name
(GenBank) pectate lyase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sfug
Streptomyces fungicidicus
Pathway
sfug00040
Pentose and glucuronate interconversions
sfug01100
Metabolic pathways
sfug02020
Two-component system
sfug02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfug00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CNQ36_16120
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CNQ36_16120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNQ36_16120
Enzymes [BR:
sfug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
CNQ36_16120
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CNQ36_16120
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
Pectate_lyase_4
Beta_helix
DUF5508
Motif
Other DBs
NCBI-ProteinID:
AYL36821
UniProt:
A0A494V1Q5
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All DBs
Position
3573803..3575872
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AA seq
689 aa
AA seq
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MSEHRSTSRHRGSRKFLAVGLPVALTTAGLLVNGVGLAPQQASAATAAAAAPAWATATAD
GFASVDALGQNGTYGGRDGRIVTVRTQADLEKYATAAEPYVIVVAGTITMNPVGKEIKVA
SDKTIVGSGTSGHIVGGGFFLGQGVHNVIIRNLTIRDAYQGVWNDKEHDFDAVQMDGAHH
VWIDHNDLRNMADGLIDVRKDSTYVTVSWNELSQNNKTFGIGWTENVTTDITIHHNWFRE
TEQRNPSTDNAAHAHLYNNFLEDVAGTSINSSYGNYSRGGTRMVLENSYFQGMKNPVIKD
ATATLVQRGNVFSGTSGRNESGGTAFDPRTYYAYTLDKAADVPALLRSGTGPRTTIGTTA
ATDVTAKAAAATTLTVAKDGTGQYKTVQAAVNAVPANNPSRVVVSIKPGTYRETVKVPSN
KPHVTFQGTGGSRKDTVIVYNNAAGTRKPDGSGTYGTSGSATVAVEADDFQARNLTVSND
FDEGANQSLSGHQAVALRTAADKVFLDGVIVEGDQDTLLLDTAAKDRLGRVYVTNSYVVG
NVDFVFGRATAVLDRSVITLKKRWDGSSAGYITAPSTAANRKGFLIANSTVNGDVSDRTF
YLGRPWHAGGDASLDPQTTVRNTTLSAAIRTTPWTDMSGFSWKDDRFAEYRNTGSGSGSA
SSNRPHLTDAQAADQEVADWLAGWTPTAS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaccgcagcacgtcccgccaccgcgggtcccggaagttcctggccgtcggc
ctccccgtggccctgaccaccgccggactcctggtcaacggcgtcggcctggccccccag
caggcgtcggccgcgacggcggccgccgcggcccccgcctgggccaccgccaccgccgac
ggcttcgcctccgtcgacgcgctcggccagaacggcacgtacggcggccgggacggtcgg
atcgtcaccgtgcggacccaggcggacctggagaagtacgccacggccgccgagccgtac
gtcatcgtcgtggccgggacgatcacgatgaacccggtcggcaaggagatcaaggtcgcc
tccgacaagacgatcgtggggtccggcacctccggccacatcgtcggcgggggcttcttc
ctcggccagggcgtgcacaacgtgatcatccgcaacctgacgatccgggacgcctaccag
ggcgtctggaacgacaaggagcacgacttcgacgcggtccagatggacggcgcgcaccac
gtctggatcgaccacaacgacctgcggaacatggcggacggactgatcgacgtccgcaag
gacagcacgtacgtgacggtctcctggaacgagctgagccagaacaacaagaccttcggc
atcggctggaccgagaacgtcaccacggacatcacgatccaccacaactggttccgcgag
accgagcagcgcaacccgtccaccgacaacgccgcccacgcgcacctctacaacaacttc
ctcgaggacgtcgcgggcacgagcatcaactcctcgtacggcaactactcgcgcggcggc
acccggatggtcctggagaacagctacttccagggcatgaagaacccggtcatcaaggac
gcgacggcgaccctcgtgcagcgcggcaacgtcttctcgggcacgtcgggccgcaacgag
agcggcggtacggcgttcgaccccaggacgtactacgcgtacacgctcgacaaggcggcg
gacgtgccggcgctgctgaggtcgggcacgggcccgcgcacgaccatcggcacgacggcg
gcgacggacgtcacggcgaaggcggcggcggccacgacgctcaccgtcgccaaggacggc
accggccagtacaagaccgtccaggcggcggtgaacgcggtccccgcgaacaacccctcc
cgcgtcgtcgtctccatcaagccgggcacgtaccgcgagacggtcaaagtcccgtccaac
aagccgcacgtcaccttccagggcaccggcggcagccgcaaggacacggtgatcgtctac
aacaacgcggcgggcacccggaagccggacggctcgggcacctacggcacctcgggcagc
gcgacggtcgccgtcgaggccgacgacttccaggcccgcaacctgacggtctccaacgac
ttcgacgagggcgccaaccagtccctctccggccaccaggcggtcgccctgcgcaccgcg
gccgacaaggtcttcctggacggcgtgatcgtcgagggcgaccaggacaccctcctgctc
gacacggccgccaaggacaggctgggccgggtctacgtcaccaactcctacgtcgtcggc
aacgtcgacttcgtcttcggccgggcgaccgcggtgctcgaccgctccgtcatcaccctg
aagaagcgctgggacggctcctcggccggatacatcacggccccgagcacggccgcgaac
cgcaagggcttcctcatcgccaactcgacggtgaacggcgacgtctccgaccgcaccttc
tacctcggccgcccctggcacgccggcggcgacgcgtccctcgacccgcagaccacggtc
cgcaacaccaccctgagcgccgcgatccgcaccacaccgtggaccgacatgagcggcttc
tcctggaaggacgaccgcttcgccgagtaccggaacaccggctccggctccggctcggcg
agcagcaaccgcccccacctgaccgacgcccaggcggccgaccaggaggtcgcggactgg
ctggcgggctggacgcccacggcgtcctga
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