Shigella flexneri 8401 (serotype 5b): SFV_2095
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Entry
SFV_2095 CDS
T00377
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Pathway
sfv00521
Streptomycin biosynthesis
sfv00523
Polyketide sugar unit biosynthesis
sfv00541
O-Antigen nucleotide sugar biosynthesis
sfv01100
Metabolic pathways
sfv01110
Biosynthesis of secondary metabolites
sfv01250
Biosynthesis of nucleotide sugars
Module
sfv_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SFV_2095 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SFV_2095 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SFV_2095 (rfbC)
Enzymes [BR:
sfv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SFV_2095 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABF04222
UniProt:
Q0T393
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All DBs
Position
complement(2117083..2117628)
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AA seq
181 aa
AA seq
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MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAVGRKVEFVQDNHSKSTKGVLRG
LHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGFAHG
FCVLSDEAEFVYKTNNFYSKMQERGILWSDKSINIEWPVQNPLLSDKDINGQKFVDADYF
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattaaaactgaaattcctgatgtgctaatttttgaaccaaaagtatttggt
gatgagcggggcttttttatggaaagcttcaatcagaaagttttcgaagaggctgtagga
cgaaaggttgagtttgttcaggataaccattctaaatcaactaagggtgtgttacgcgga
ctgcactatcagctggaaccttatgctcaaggaaaactggtacgctgtgttgtcggtgaa
gtttttgacgtagctgttgatattcggaaatcatcaccaacatttggcaagtgggttggt
gtaaatttgtcggcggagaataagcgtcaattatggataccggaaggattcgctcatggg
ttttgcgttcttagtgatgaagcagaatttgtctacaaaacaaataatttctattcaaaa
atgcaagagcgtgggattttatggagcgacaaaagtataaatatagaatggccggttcaa
aatccattgctttctgataaagatattaatggtcaaaaatttgtagatgctgattatttt
atatga
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