Shigella flexneri 2457T (serotype 2a): S0055
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Entry
S0055 CDS
T00128
Symbol
yabO
Name
(GenBank) hypothetical protein
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfx03009
]
S0055 (yabO)
03016 Transfer RNA biogenesis [BR:
sfx03016
]
S0055 (yabO)
Enzymes [BR:
sfx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
S0055 (yabO)
5.4.99.29 23S rRNA pseudouridine746 synthase
S0055 (yabO)
Ribosome biogenesis [BR:
sfx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
S0055 (yabO)
Transfer RNA biogenesis [BR:
sfx03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
S0055 (yabO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AAP15599
UniProt:
P0AA38
LinkDB
All DBs
Position
complement(57100..57759)
Genome browser
AA seq
219 aa
AA seq
DB search
MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESV
HRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWP
NRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRF
YASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggggatggaaaactacaatccaccgcaggaaccctggttggttatcctgtatcaggat
gaccatattatggtggtcaacaagccgagcggtttgttgtcagtgccgggtcgtctggaa
gagcacaaagacagcgtgatgacgcgcattcagcgtgattatccgcaggcagaatcggtg
catcgtctggatatggctaccagcggcgtgattgtagtggcgctgaccaaagccgcggag
cgggagttaaaacgccagttccgcgagcgcgagccgaaaaagcagtatgtggcccgcgtc
tgggggcatccatcccccgcagaaggtctggtggatctgccgctgatttgcgactggcca
aaccgcccgaaacagaaagtctgttacgaaacgggtaaacctgcgcagacggaatatgaa
gtggtggagtatgcggcggataacacggcaagagtggtgttaaaaccgattaccgggcgt
tcgcatcaattgcgtgtgcatatgctggcgctggggcatccgattctcggcgatcgtttt
tatgcatcaccagaagcgagagcgatggcaccgcgtttgttgctacatgcagagatgttg
acgattacccatccggcgtatggcaatagtatgacgtttaaagcgccagcggatttttaa
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