Streptococcus agalactiae GD201008-001 (serotype Ia): A964_1341
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Entry
A964_1341 CDS
T02248
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sgc
Streptococcus agalactiae GD201008-001 (serotype Ia)
Pathway
sgc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A964_1341 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgc03021
]
A964_1341 (rpoD)
Transcription machinery [BR:
sgc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A964_1341 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AFS46106
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All DBs
Position
complement(1385902..1387011)
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AA seq
369 aa
AA seq
DB search
MAEKKGNTTFNVQVADFIRNHKKQGTAIDDEVTEKLVIPFVLDADQIDDLLERLTDGGIS
ITDKEGNPSTKYVVEGPKPEELTDEELIGSNSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
AVAVAEGDLMAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLKDFMED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaaaaggaaatacaacttttaatgttcaagttgcggattttattcgtaat
cataaaaaacaaggtactgcaattgatgatgaggtaacagaaaaacttgttattcctttt
gttttagatgcagatcaaattgatgatttgttagaacgattgacagacggtggaatttca
attacagacaaagaaggcaatccttcaacaaagtatgtggtagaagggccaaaacctgaa
gaattgactgatgaagagctcataggaagtaattctgctaaagttaatgacccagtacgt
atgtacttaaaggaaattggtgttgttcctcttttaacgaatgaagaagaaaaagaattg
gctgttgcggttgccgagggagatttaatggctaaacaacgtttagctgaagcaaacctt
cgtcttgttgtctcaattgcaaaacgttatgttggacgtggaatgcaatttcttgattta
attcaagagggtaacatggggctcatgaaagctgttgataaatttgattattcaaaggga
ttcaaattttcaacttatgcaacatggtggattcgtcaagctataacacgtgcaattgca
gatcaagcgcgtacgattcgtattcctgttcatatggttgaaacgattaataaattggtc
cgtgaacaacgtaatcttcttcaagaacttggtcaagatccaactcctgagcaaatcgca
gaacgcatggatatgacaccagataaagtacgtgaaatcctaaaaattgctcaagagccg
gtatcgctagaaacgccaataggtgaggaagatgatagccatttgggtgatttcattgaa
gacgaagttattgaaaatccagtagattatactacacgtgttgttcttcgtgagcaatta
gatgaggttttagatactcttactgaccgtgaagagaatgttcttcgtttacgctttggt
cttgacgatggtaaaatgcgtacgttagaggacgtaggtaaagtatttaatgttacccgt
gagcgcattcgtcagattgaagctaaagcccttagaaaacttcgccatcctagtcgtagc
aagcaacttaaagatttcatggaagattga
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integrated database retrieval system
