Stenotrophomonas geniculata: RKE57_17875
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Entry
RKE57_17875 CDS
T09411
Name
(GenBank) family 20 glycosylhydrolase
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00511
Other glycan degradation
sgen00520
Amino sugar and nucleotide sugar metabolism
sgen00600
Sphingolipid metabolism
sgen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
RKE57_17875
09103 Lipid metabolism
00600 Sphingolipid metabolism
RKE57_17875
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RKE57_17875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sgen03110
]
RKE57_17875
Enzymes [BR:
sgen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
RKE57_17875
Chaperones and folding catalysts [BR:
sgen03110
]
Intramolecular chaperones
Others
RKE57_17875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glyco_hydro_20b
CHB_HEX_C_1
Fn3_assoc
CBM_6
Urocanase_N
Motif
Other DBs
NCBI-ProteinID:
WNF09913
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All DBs
Position
3896684..3899038
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AA seq
784 aa
AA seq
DB search
MVKPSRARMRSAVLLGSLLALLPALPALAADPTPAAEAPGPQLRAGSLMLIPAPATVQRG
QGSGITVRADTVLQAEGEAAQRVANQFADLLARSGGPRLALAKGKASAKAGSIRFQIVPT
FRDSGEGYTLESTAQGVLVQAGNETGLFYGATTLAQLATGGSNGVLPAVQIQDAPRFSWR
GFMLDSARHFQSLDEIKHVLDAMAAHKLNTFHWHLTDDQGWRMEIKRYPKLTDVGSCRLP
AGDGGIDPVSGQEHPYCGFYTQEQIREVIAYAAKLHIQVIPEIDVPGHATAAIAAYPELG
SIDTPLKPISEWGVFPNLFNVEDSTVTFLENVLEEVIALFPAKYVHVGGDEAVKDQWEAS
KQVQQRMRALGIKNEMAMQSHIIKRLETFLEEHDRRLIGWDEILEGGLPPQATVMSWQGT
EGGLAAASAGHDVIMSPVGYLYLDYLQTASPNEPPGRPTQVNLGKLYNFEPVPAELAADK
RGHILGLQANMFTEHTRSYARLQHNLFPRLAAVAETGWSTSEHRDFRDFLARLPSQLQRY
RAWGLAYAQTPFEVGVDYTDNRAAGTVTVSLANPLGYEVRYSTDGQPVTAQSPLYQQPLT
GKLPTTVQAAAFYQGQMLAAKPTIAAFTVQSLLSRRSDELLSCVGTKGLVLRLEDDGPRE
GTRAVFNVDIFQPCWRWPQAQLDGIGNVEVRAGRIPYYFQLAHDEPKRRFEKARSAHGEM
LIRRGDCTGKVLAQVPLPAQTDADGFVTLRAALPKGTAGNGDLCINFTGDTRPAMWVLDE
VTLR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagccttcccgcgcccggatgcgcagcgcagtgctgctgggcagcctgctcgcc
ctgttgccggcgctgccggcacttgccgccgaccccacgcctgccgctgaagcacccggc
ccgcagctgcgcgccggcagcctgatgctgattcccgccccggccaccgtgcagcgcggc
cagggcagcggcatcaccgtgcgcgccgataccgtgctgcaggccgaaggcgaagccgcg
cagcgcgtcgccaaccagttcgccgacctgctggcccgcagcggtggcccgcgcctggca
ctggccaagggcaaagccagcgccaaggccggcagcatccgcttccagatcgtgcccacc
ttccgcgacagcggtgagggctacacgctggaaagcaccgcacagggcgtgctggtgcag
gctggcaacgaaaccggcctgttctacggcgcgaccaccctcgcccagctcgccaccggc
ggcagcaacggcgtgctgcccgcagtgcagatccaggacgcgccgcgcttcagctggcgc
ggcttcatgctcgactccgcccgtcacttccagagcctggacgagatcaagcacgtgctc
gacgcgatggccgcgcacaagctcaacaccttccactggcacctgaccgacgaccagggc
tggcgcatggagatcaagcgctacccgaagctgaccgacgtgggcagctgccgcctgccg
gccggtgacggcggcatcgatccggtcagcggccaggagcatccgtactgcggcttctac
acccaggagcagatccgcgaagtgatcgcctatgccgcgaagctgcatatccaagtgatt
ccggaaatcgatgtaccgggccacgcgactgctgcgattgctgcgtatccggagctgggc
agcatcgatacgccgttgaagccgatcagcgaatggggcgtgttcccgaacctgttcaac
gtggaagacagcaccgtcaccttcctcgagaacgtgctggaagaagtgatcgcgctgttc
ccggccaagtacgtgcacgtcggtggcgacgaggcggtgaaggaccagtgggaagcgtcg
aagcaggtgcagcagcgcatgcgtgcgctgggcatcaagaatgaaatggccatgcagagc
cacatcatcaagcgcctggaaaccttcttggaggagcacgaccggcgcctgatcggctgg
gatgaaatcctcgaaggcgggttgccgccgcaggccacggtgatgtcgtggcagggcacc
gaaggcggcctggctgcggccagcgccggccatgacgtgatcatgtcgccggtcggctac
ctgtacctggattacctgcagacggcctcgccaaatgaaccgccgggccgtccgacccag
gtcaacctcggcaagctctacaacttcgagccggtgccggccgagctggccgccgacaag
cgtgggcacatcctgggcctgcaggccaacatgttcaccgagcacacgcgcagctatgca
cgcctgcagcacaacctgttcccgcgcctggccgcggtggccgagaccggctggagcacg
tcggagcatcgcgacttccgcgatttcctcgcgcgcctgccctcccaactgcagcgctac
cgtgcctggggcctggcctatgcgcagaccccgttcgaagtgggcgtggactacaccgac
aaccgcgcggccggcacagtgaccgtgtcgctggccaatccgctgggttatgaagtgcgc
tacagcaccgatggccaaccggtgaccgcgcagtcgccgctgtaccagcagccgctgacc
gggaaactgccgaccaccgtgcaggcggcggcgttctaccaggggcagatgctggccgcg
aagccgaccatcgccgcattcaccgtgcagtcgctgctcagccgccgcagcgatgagctg
ctcagctgcgtgggcacgaagggcctggtattgcgcctggaagacgatggcccgcgtgag
ggaacgcgtgcggtgttcaacgtggacatcttccagccgtgctggcgctggccgcaggcg
cagctggacggcatcggcaacgtggaagtgcgtgcggggcgtattccgtactacttccag
ctggcccacgacgagccgaagcgccgcttcgaaaaggcccggagcgcacacggtgaaatg
ctgatccgtcgcggtgattgcacgggcaaggtgctggctcaggtgccgctgccggcgcag
accgatgccgacggcttcgtgaccctgcgcgcggcgctgccgaagggcaccgctggcaac
ggcgatctgtgcatcaacttcaccggcgacacgcgcccggcgatgtgggtgctggatgag
gtcacgctcaggtag
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