Stenotrophomonas geniculata: RKE57_20675
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Entry
RKE57_20675 CDS
T09411
Name
(GenBank) NAD-dependent epimerase/dehydratase family protein
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00053
Ascorbate and aldarate metabolism
sgen00520
Amino sugar and nucleotide sugar metabolism
sgen00541
O-Antigen nucleotide sugar biosynthesis
sgen01100
Metabolic pathways
sgen01240
Biosynthesis of cofactors
sgen01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
RKE57_20675
00520 Amino sugar and nucleotide sugar metabolism
RKE57_20675
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RKE57_20675
Enzymes [BR:
sgen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
RKE57_20675
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
adh_short
KR
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
WNF10442
LinkDB
All DBs
Position
complement(4499423..4500388)
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AA seq
321 aa
AA seq
DB search
MTILLTGAAGFIGAYTARALLEAGQPVVGLDNFNDYYDPQIKRDRVAALCPALDLRTLDL
TDQQGLAALFDEVKPTAVIHLAAQAGVRYSLENPHAYVDSNLVGFVNMLELCRHRGVQHL
VYASSSSVYGDSATPPFSEDQRVDQPRSLYAATKAANELMAYTYAQLYGLHATGLRFFTV
YGPWGRPDMAPLLFSRAVLAGRPIDVFNEGRMQRDFTHVSDIVSGILGALAHPADGPVPH
RVFNLGNHTPVELERFISVIEQAAGRPAQKVYKPMQPGDMVRTMADTRRAHDAFGFDAVT
PIEEGLPPVVQWCREYFGDRA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctgctcaccggcgctgccggcttcatcggtgcctacaccgcccgcgcgctg
ctggaggcgggccagccggtggtcggcctggacaacttcaacgactactacgacccgcag
atcaagcgcgaccgcgtggcagcgctgtgcccggcgctggacctgcgcaccctggacctg
accgaccagcagggcttggcggcactgttcgacgaagtgaagccgaccgcggtgatccat
ctggccgcgcaggccggcgtgcgctattcgctggaaaacccgcatgcctacgtcgacagc
aacctggtcggcttcgtcaacatgctcgagctgtgtcgccaccgtggcgtgcaacacctg
gtctatgcctccagcagttcggtctacggcgattcagccacgccgccgttctccgaggac
cagcgcgtggaccagccgcgctcgctgtacgcggcgaccaaggcggccaacgagctgatg
gcctacacctacgcgcagctttacggcctgcatgccaccggcctgcgcttcttcaccgtg
tatggcccgtggggccggccggacatggcgccgctgctgttctcgcgcgcggtgctggcg
gggcggccgatcgacgtgttcaacgaaggccgcatgcagcgcgatttcacacatgtctcc
gacatcgtgtcgggtattctcggcgcgctcgcgcatccggccgatggtccggtaccgcac
cgggtgttcaacctcggcaaccatacgccggtcgagctggagcgcttcatcagcgtgatc
gagcaggcggccggccgccccgcgcagaaggtctacaagcccatgcagcccggcgacatg
gtacgcacgatggccgacacccggcgcgcccatgacgcattcggcttcgatgcggtgacc
ccgatcgaagaagggttgccccccgtcgtgcagtggtgccgcgagtactttggtgatcgc
gcctga
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