Sinocyclocheilus grahami (golden-line barbel): 107550761
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Entry
107550761 CDS
T04918
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013
Nucleocytoplasmic transport
sgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107550761 (upf3b)
03015 mRNA surveillance pathway
107550761 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107550761 (upf3b)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107550761 (upf3b)
mRNA cycle factors
P-body specific factors
107550761 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
107550761
NCBI-ProteinID:
XP_016087617
UniProt:
A0A672T940
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MKEDKENTRPREKKVEIKCDEIEKAEKPNKEKKEAMTKIVIRRLPPSLTKEDLVEQLQPL
PELDYLEFFSSDTSLFPHLFARAYLNFKNQDDIVLFRDRFDGYVFIDNRGQEYPAIVEFA
PFQKIAKKRSKKKDAKSGTIEDDVDYKNFLEFYNGDEEKFPSNPETLLEEIEAKTKELSA
KKTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWKEEDRRKRKEAEKLKKGE
KADKDQPKNELPKIKLLKKTEKAGDGDAEKPKDKPKKQDREKQKEDRPPVGGDPKKRQNG
EHREEKGGKSEDSGHKNFRDRDGERDRDRERERRQKEKERFRRQDEERRKRERQDRENTY
KKRDEEGKKDKERVWEKRKNENAGESSVNAHPEKPSRDNKKEDSAKKDRLRNKDRPAIQL
YQPGARSRNRSGGGTGGDEPAAEKRAEQESKNTQEKAAE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggaaaacacgcgtcccagagaaaagaaagtggaaataaaatgtgac
gaaattgagaaagcagagaagccaaataaagagaagaaggaggctatgacaaagattgtg
attcgacgtctccctccaagtctaactaaagaagacttagtggaacaactgcagcctctt
ccagagctggattacctggagtttttctctagcgatactagtcttttccctcatctgttt
gcaagagcctatctgaatttcaaaaatcaagatgacatagttctcttcagagaccggttt
gatggctatgtcttcattgataatcgaggtcaagaatatccggcaattgttgagtttgca
ccattccagaaaattgctaagaaaaggagcaagaagaaggatgcaaaaagtggaacaatt
gaagatgatgttgattacaaaaattttttggagttctacaatggtgacgaggaaaaattt
ccttccaaccctgagactttacttgaagaaatagaggccaagacaaaggaactcagtgct
aaaaaaacaacacctctattggacttccttaagaataaacagaggattagagaagagaag
aaagaagagaggagacggagagaactcgaacgtaaacgcctgcgagatgaagaacggcgc
aagtggaaagaggaggacagaagaaaaagaaaagaggctgagaaattgaaaaaaggagaa
aaggctgataaggaccaacctaaaaatgaactgccaaaaatcaagctcttgaaaaaaaca
gagaaagcaggtgatggtgatgctgagaagccaaaggacaagcccaagaaacaagaccga
gagaaacagaaggaagatcgacctcctgtaggaggagacccaaagaagcgtcagaatggt
gaacacagagaggagaaggggggaaagtcagaggatagtgggcataaaaatttcagagat
cgtgatggagagcgagaccgggacagagagagagagcgaagacagaaagaaaaagaacga
ttcagaaggcaggatgaagagcgaaggaaaagggaacgtcaggatagagaaaacacctac
aaaaagagagacgaggaggggaagaaggacaaggagcgtgtttgggagaaaagaaagaat
gaaaacgccggagagtcctccgttaatgctcaccctgaaaagccatctagggacaacaaa
aaagaagacagtgccaaaaaagaccgtctgagaaacaaggatcggcctgcaattcagctg
taccagcccggggcgaggagccgtaaccggagcggaggaggaacaggaggagatgaaccg
gcagcagagaagagagctgagcaggagtccaagaacactcaagagaaagctgctgagtga
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