Sinocyclocheilus grahami (golden-line barbel): 107560750
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Entry
107560750 CDS
T04918
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107560750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sgh04054
]
107560750
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107560750
Pattern recognition receptors [BR:
sgh04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
107560750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
Helicase_C
Hydantoinase_B
DUF5740
CblD
Motif
Other DBs
NCBI-GeneID:
107560750
NCBI-ProteinID:
XP_016100494
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
CSENRMELKLLASNARYENPKLARLQRTLLDEFSDKNSRGILFSKTRRGTHCLYDWVNSN
SELLRVSIKAGILTGAGTGANHMTQNGQKETIQQFRDGILNLLISTSVAEEGLDIPECNL
VVRYGLLTNEIAQQQASGRARAMNSIYSVVAEEGGRELRRELINEYLESLTAKAIDQVQQ
MSPREFRHKISELQQIAVLIRIQAERKKDERKQRYSPGQAQFQCRECFLPVCSGEDLRKI
ENTHHVNINPEFVRHYRTGGQVSLERNFEDWEPGRVISCNKCGKDWGMEIRFRNVVILPC
LKIKSFSLKTPGGKSTPKQWKDVEFQVKEFDFLEDMSSRFPDLDLDD
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
tgctcagagaaccgcatggagcttaaactgctggcatcgaatgcccgctacgaaaacccc
aaactggcccgtttgcaacgcacattgctggatgagtttagtgacaaaaactctcgtggt
atcctcttctcaaagacccgcaggggcacccattgtctttatgactgggtgaactccaac
tctgagctgctgagggtcagcatcaaagctggcattctcactggagcgggtacaggtgca
aatcacatgacccagaatggacagaaggaaaccatacaacaatttagagatggaatcctc
aacctcctcatctccaccagtgtagctgaggaaggacttgatattccagaatgcaactta
gttgtacgttacgggctgttgaccaatgagattgctcagcagcaggccagtgggcgggct
cgagctatgaacagcatctattcagtggtggctgaagaaggtgggcgtgaactacgcagg
gaacttatcaatgagtatctagaaagtctgactgcaaaagctattgaccaagtgcagcaa
atgagtcccagagagtttagacacaagatatccgagctccaacaaatcgctgttctgatt
cgaatccaggccgagaggaaaaaggatgagaggaagcaacgctatagtcctggtcaggct
cagtttcaatgcagagaatgcttcttgcctgtctgcagtggagaagatttaagaaaaata
gaaaatacacaccatgtcaacatcaaccctgagtttgtgaggcattatagaacaggtggg
caggtctctctggagaggaactttgaagattgggagcctggacgggttatcagctgcaac
aaatgtggaaaggactggggaatggagattaggttcaggaatgtggtaatactcccctgc
ttaaaaataaaaagcttttccttgaagactcctggaggcaaatccactcccaagcagtgg
aaggatgttgagttccaggtgaaagagtttgactttcttgaggacatgagcagccgtttc
cctgacctagacttagatgactga
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