Sinocyclocheilus grahami (golden-line barbel): 107563405
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Entry
107563405 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32-like
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107563405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107563405
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107563405
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107563405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_2
zf-B_box
zf-C3HC4_4
Baculo_IE-1
zf-RING_4
GIY_YIG_2
Motif
Other DBs
NCBI-GeneID:
107563405
NCBI-ProteinID:
XP_016103763
UniProt:
A0A672SHA6
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MATPMSLDPDLVREVLECPICLETYNQNQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCGSTMGLMCKSCKNRLPRQYCFDCSIVLCDI
CKNEGHQHQGHVVQATRVAAEQWRKDISGKLSNLREAMGNIQKKKAAIDNVTKSLRLKYK
AVQQEYAKTELRLQEELGRSRRAFATSLAEIEKLNAQILEEQTYLLNIAEVQVVSRCDYL
TMRIKQTDIALLEEGSNNEEEELDLKTNLPVILKLQEPEFVQTECSKPLDVGHLTTKPCT
VNAEEEDGLDFDTSVAAPLDIYRDIDMETAVEEAVCASPGSFKSKSVDGGGPSPGASGGQ
LCQFVKKMGCKGNLPGMFNLPVSICVTLQGEVLVADRGNYRIQIFNRKGFQREIRRNPSS
IDNFVLSFLGADMPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGQCVACHKNQLIKPW
GIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNCNRLCSAVRPKFVTCDSSGTVYFTQGL
GLNIENRHNEHHLEGGFSIGSVGMDGQLGKQLSHFFSETEDFRCITGMCVDSNGDLIVTD
SGRKEILQFPKEGGYNILLQEGLTCPVGVAVTQKGQLLVLDCWDHCVKVYTYLQRRRSST
C
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccaatgtctttagatccagatttggttcgggaggtgctggaatgtcccatt
tgtctggagacctacaaccagaatcagcttcgacccaaactgctgcagtgtggtcattct
gtgtgtcgccagtgtcttgagaaactcctcgccagtacgataaatggcgtgcgctgtccc
ttctgcagcaaggtgtctcgtatgagcagtatttcccagctggctgacaatctcaccgtg
ctgaagataatcgactgtgcaagttcatgtggctctactatgggtctcatgtgcaagtct
tgtaaaaatcgcctgccccggcagtactgctttgactgcagcatcgtgttatgtgatatt
tgtaaaaatgagggtcaccagcatcagggtcacgtcgtacaggccactcgtgtggctgcc
gaacagtggcggaaagacatcagcgggaagctttctaacttgcgggaagcaatgggaaac
attcagaagaagaaggcagctattgacaacgtgacaaaatcactcagactgaagtacaag
gctgtacagcaggaatacgccaagactgagttgcggctccaggaggaacttggtcgttca
cgccgtgccttcgccacctccttggccgaaatagaaaaactcaatgcccagattctggag
gagcaaacgtacctgctcaatatcgctgaagtgcaggtggtgtctagatgtgactatcta
accatgaggatcaagcagacggatattgctttactggaggaagggagcaacaatgaagaa
gaagagttggacttaaaaaccaatctgcccgtcattctgaaactacaagaacccgaattt
gttcaaacggagtgctcgaaacccttggacgttgggcatttgaccacaaaaccctgtact
gtcaatgctgaggaagaagacggacttgatttcgacacttccgttgccgcccctttggac
atttaccgtgatattgacatggaaacggcagtcgaagaggccgtttgcgcttctcccggc
agcttcaagtccaagtctgtcgacggaggtggaccttctccaggagcttctggtgggcaa
ctctgtcagtttgtgaaaaagatgggctgcaagggcaatctgccgggcatgttcaatttg
ccggtaagcatttgtgtcacgctgcagggcgaggtgctcgtggccgaccgaggaaactac
cgcatccagatcttcaaccgcaagggcttccaaagggagatacggcgtaacccgagcagc
atcgacaactttgtcttgagtttcctaggtgctgacatgcccaacctcatcccgctctcc
attgcaatcactgctcagggcctcatcggtgtcactgataactatgacaactctgtgaag
gtttacaccactgatggccagtgcgttgcttgtcacaagaaccagctcatcaagccatgg
ggaatcgcagccatgccgtcgggccagtttgtcgtgtcagatgttgaggggggaaagctg
tggtgcctggccgtggatcgtaatgtaggggttgtgaattgcaaccgcttatgttcggct
gtcaggcccaaatttgtaacttgtgactcctcaggtacagtctacttcacacagggcttg
ggtctaaacatcgagaatagacacaatgaacaccaccttgagggggggttctcaatcggc
tcggtgggaatggatggccagctgggaaagcaactcagtcacttcttttcagagactgag
gactttcgatgcatcaccggcatgtgtgttgactccaacggggacctgatcgtgacagac
agtggccgtaaggagatattgcagtttcctaaagaaggtggctataatattctccttcag
gagggcctaacttgccctgtaggggtagctgttacccaaaagggacaactgctcgtctta
gattgctgggaccactgtgtgaaggtctacacttacttgcaaaggagacgttcctctaca
tgttaa
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