Sinocyclocheilus grahami (golden-line barbel): 107564424
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Entry
107564424 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32-like
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107564424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107564424
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107564424
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107564424
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-B_box
zf-RING_4
CarbpepA_inh
GIY_YIG_2
Adhesin_P1_N
Motif
Other DBs
NCBI-GeneID:
107564424
NCBI-ProteinID:
XP_016105002
UniProt:
A0A672RWY0
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MATPTSLDPDLVREVLECPICLEMYNQDQLRPKLLQCGHSVCRQCLEKLLASTINGVRCP
FCSKVSRMSSISQLADNLTVLKIIDCASSCNSTMGLMCKSCKNRLPRQYCSDCSIVLCDI
CKNEGHQCQGHVVQAIRVAAEQCRKDISGKISNLREAMGNIQKKKATIDNVTKSLRLKYK
AVQQEYAKAELRLQEELGRSRRAFATSLAEIEKLNAQILEEQMYLLNIAEVQVVSRCDYL
TMRIKQTDIALLEEGSNHEEEELDLKTNLPVILKLQDPEFVKTECSKPLDLGQLTTKPCI
VNAGEEDGLDFTTSAATPLDIYHDTDMDTAVEEAVCASPGSFKSKSVDGGRPSPGASGGQ
LCQFVKKMGCKGNLPGMFNLPVSICVTPQGEVLVADRGNYRIQIFNRKGFQREIRRNPSS
IDNFVLSFLGADLPNLIPLSIAITAQGLIGVTDNYDNSVKVYTTDGHCVACHKNQLIKPW
GIAAMPSGQFVVSDVEGGKLWCLAVDRNVGVVNYNRLCSAVRPKFVTCDSSGTVYFTQGL
GLNIENRRNEHHLEGGFSIGSVGMDGQLGKQLSHFFSETEDFRCITGMCVDSNGDLIVTD
SGRKEILQFPKEGGYNILIQEGLICPVGVAVTQKGQLLVLDCWDHCVKVYTYLQRRRSST
C
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccaacgtctctagatccagatttggttcgggaggtgctggaatgccccatt
tgtctggagatgtacaaccaggatcagcttcgacccaaactactgcagtgcggtcactca
gtttgtcgtcaatgccttgagaaactcctcgccagcacgataaatggcgtgcgctgcccc
ttctgcagcaaggtgtctcgtatgagcagtatttcccagctggctgacaatctcaccgtg
ttgaagatcattgactgtgcgagttcatgcaactctaccatgggtctcatgtgcaaatct
tgtaaaaaccgcctgccccggcagtactgcagtgactgcagcatcgtgttgtgtgatatt
tgtaaaaacgagggccaccagtgtcagggtcacgtcgtacaggccattcgcgtggctgcc
gaacagtgccggaaggacatcagcgggaagatttctaacttgcgggaggcaatgggaaac
attcagaagaagaaggcaactattgacaatgtgacaaaatcactcagactgaagtacaag
gctgtacagcaggaatacgccaaggctgagttgcgactccaagaggaacttggccgctca
cgccgtgcctttgccacctccttggccgaaatagagaaactcaatgcccagattctggag
gagcagatgtacctgctcaatatcgctgaagtgcaggtggtgtcaagatgtgactatctt
accatgaggatcaagcagacggatattgctctactggaagaagggagcaaccatgaagaa
gaagagttggacttaaaaactaatttgcctgtcattctgaaactacaagaccctgaattt
gttaaaacggagtgctcgaaacctttggacttggggcagctaaccacaaaaccctgcatt
gtcaatgccggggaagaagacggacttgatttcaccacttccgctgccaccccattggac
atttaccatgatactgacatggatacggcagttgaagaggctgtttgcgcttctcccggt
agcttcaagtccaagtctgtcgacggtggtagaccttctccaggagcttctggtgggcaa
ctctgtcagtttgtgaaaaagatgggctgcaagggcaatctgccgggcatgttcaacttg
ccggtaagtatttgcgtcacgccgcagggcgaggtgcttgtggccgaccgaggaaattac
cgcatccagatcttcaaccgcaagggcttccaaagggagatacggcgcaacccgagcagc
atcgacaactttgtcttgagcttcctaggtgccgacctgcccaacctcatcccgctctct
attgcaatcactgctcagggcctcatcggtgtcaccgacaactatgacaactctgtgaag
gtttacaccactgatggccactgcgtcgcctgtcacaagaaccagctcatcaagccatgg
ggaatcgcggccatgccttcaggccagttcgttgtgtcagatgtagaggggggaaagctg
tggtgccttgccgtggatcgtaacgtaggggttgtgaattacaatcgcttgtgctcggcc
gtcaggcccaaatttgtaacttgcgactcctcaggtacagtttacttcacacagggcttg
ggtctaaacatcgagaatagacgcaacgaacaccaccttgaggggggtttctcaattggg
tcggtgggaatggatggccagctgggaaagcaactcagccacttcttctcagagaccgag
gacttccgatgcattaccggcatgtgcgtggactctaatggagacttgattgtgacagac
agtggccgtaaggagatactacagttccctaaagaaggtggctataatattctcattcag
gagggcttaatatgccctgtaggggtagctgttacccagaagggacaactgctcgtctta
gattgctgggaccactgtgtgaaggtctacacttacttgcaaaggagacgttcctctaca
tgttaa
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