Sinocyclocheilus grahami (golden-line barbel): 107574736
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Entry
107574736 CDS
T04918
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107574736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107574736
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
107574736
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107574736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
107574736
NCBI-ProteinID:
XP_016116672
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MDERLYGSLPHAPSEYLQQWVQSAQQHLQALQAQYPHMANGNAGFMMEGPREDGGMQQMP
AHLDDAAQLEPAAAQKAPAKGKRGRPASKEPKAKGEPKAKPGPKPKKAKEDKEALPAEGQ
EKIDGTFKKVKRKVDRFKGMSEEEVMKKTLPDILTPNLDYVIIGINPGLMAAYIGRWFPG
PGNHFWKCLFLSGFTEKLLNHMDDESLPEKYSIGFTNMVARATPGSKDLSSKELREGGKI
LVEKIKKFKPLIAVFNGKCIYEMFCREIFGKKPKTLAFGLQPHKIPDSETALYLMPSSSA
RCAQFPRAQDKVHFYIKLRELRDQLKGVIRPVEIEEVKYIFDLGMAKEDAKRMAIKEEHY
DPGYEAAFGGAYGEPAPEEGQSNGYCNFSTSEKTADTVEKAPTNPNAVGQVQDGQWMMQS
FADQIPDIGSSSQAQSWGV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaggctctatggatctttgcctcatgccccctcggaatacctccaacaatgg
gttcagtcagctcagcagcatctgcaggcccttcaggctcagtatcctcacatggctaat
ggcaatgctggttttatgatggagggacccagagaagatggaggcatgcagcagatgcct
gcacacctagatgatgctgcccaactggagcctgcagctgcacagaaagcacctgctaaa
ggaaagcgaggaaggccagcgagcaaagaacctaaagccaaaggcgaacctaaagccaaa
ccgggacctaaacccaagaaagctaaagaggataaggaggccctgccagctgaaggacag
gagaagattgatggaacattcaagaaagtcaagaggaaagtcgatcgctttaagggcatg
tcagaggaggaagtcatgaagaaaacactgcctgacattcttacccccaatctggactat
gtcattatcggaattaatccagggttgatggcggcctacattggaagatggttccctgga
ccaggaaaccatttttggaagtgtctgttcctgtctggattcacagagaagttgctaaat
cacatggatgatgagagtttgcctgagaaatacagcatcggcttcacaaatatggtagct
agagcgacaccgggaagcaaagatctctctagcaaggaacttcgagaaggtggtaaaatc
ttagtggaaaagatcaagaaattcaagccactcatagcagtttttaacgggaaatgtata
tatgaaatgttctgtagggagatatttgggaagaaacctaaaacacttgcatttggccta
cagcctcacaagattcctgactctgagacggcattgtacctgatgccgtcctccagtgcc
cgctgtgctcagtttcctcgtgctcaggacaaagtgcatttttacatcaagctgagagag
ctccgagatcagctgaagggtgtgatcagaccagtggagatagaagaagtgaaatacatt
tttgatctcggcatggccaaagaggatgctaagagaatggccatcaaggaagagcattat
gatcctggttatgaggcagcttttggaggagcttatggagaaccggcacctgaagaaggc
caaagcaatggatactgtaacttctccacatctgagaaaacagctgacacagttgagaag
gcgcctacgaatccaaatgcggttggccaggttcaggacggtcaatggatgatgcagtct
tttgccgatcagatcccagacatcggcagctcctctcaagcccaaagctggggtgtatga
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