Sinocyclocheilus grahami (golden-line barbel): 107576157
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Entry
107576157 CDS
T04918
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013
Nucleocytoplasmic transport
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107576157
09122 Translation
03013 Nucleocytoplasmic transport
107576157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107576157
03041 Spliceosome [BR:
sgh03041
]
107576157
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107576157
Spliceosome [BR:
sgh03041
]
Complex C
Other components
EJC/TREX
107576157
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107576157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
107576157
NCBI-ProteinID:
XP_016117887
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MSPPSLFDFTEARDIFTAAAKSAVDIRSCKPLTNAFSQLPGNETEKKATLDQALRGVLEE
QIVKQKVDVGDFLSLIYISVDGVTEGICSATAPFLLLGDVLDCLPLDQCDKIFSFVEENV
STWKSNDILGPQVSCFNVPSIVFSVQYSDETLAVFKSFKLDDMQASKRKLEEMRTAAGDH
VYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQSLWIED
TTKLVYQLLRETPPDGDKFALMFEHILNTEENWNSWKNEGCPSFVKERPAKTKPIRPSIQ
SKAVTNSQMDEIAAKLGSQWKTLADHLEMSEKEIRVIESDSEDVELQAKMLLVAWQDREG
TQATMESLVTALNSAGFSNITEGLSET
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgccgtctctcttcgacttcactgaagccagagatatatttacggctgccgct
aaaagtgctgtagatatcaggagctgcaaacccctgaccaacgctttcagccagctgcct
ggaaatgaaactgagaagaaagccactcttgatcaagccctgcgtggagttcttgaagag
cagattgtgaagcagaaggtggacgttggagatttcctttctctgatctacatcagtgta
gacggtgtgactgaaggcatctgctctgctaccgctccttttcttctgctgggagatgtt
ctcgactgccttcctctggaccagtgcgacaaaatcttctcctttgttgaagaaaatgtg
tctacatggaagtctaatgacattcttggtccacaagtatcttgttttaatgtcccatca
atcgtgttctctgtgcagtattcagatgagacactagctgtgttcaagagcttcaaactg
gatgacatgcaagcctcaaagagaaagctggaggaaatgaggactgctgctggagaccac
gtgtactttgccaagttcctcaccagtgagaaattgatggaccttcaattgagtgacagc
aacttcagacgacacattctgcttcagtatctcatcctcttccagtatctcaagggccag
gtcaagttcaagagttccagctgtgttttgaatgacgatcagtctttgtggattgaggac
acgaccaaactagtctatcagttactgagagaaacccctccagatggtgacaagtttgcg
ttgatgtttgagcacatcctgaacacagaagaaaactggaactcttggaaaaatgaaggc
tgtccaagctttgtgaaagaaagaccagcaaagaccaaacccatccgtcccagcattcag
agcaaggccgtgaccaacagtcagatggacgagatcgcagccaagcttgggtcgcagtgg
aagacgctggcagaccacctggagatgagcgagaaggagatccgcgtgatcgagtctgac
agcgaggatgtagaactacaggccaagatgctgctggtggcctggcaggaccgagaaggc
actcaagctacgatggagagcctggtcacggctctgaactcggctggtttcagtaacatc
acagaaggtctcagtgaaacataa
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