Sinocyclocheilus grahami (golden-line barbel): 107583183
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Entry
107583183 CDS
T04918
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107583183
NCBI-ProteinID:
XP_016124792
LinkDB
All DBs
Position
Unknown
AA seq
1422 aa
AA seq
DB search
MDKLTTTKIVKAEGGSGGSGKEIQRHTETVTTTRLSSLPPKGNSSSVSSQQVLTSTVTSS
GSGGASGGAVLVEKKIITQSSAEGGASSSSSGSSGSSSSGAGSVISGFDEIYRVTGPIIS
STVKSSSSAVKSSSSVSTSITTVGGSSATGGDLSSGYGCISSSEVVSGSSGGSVSVSGGS
MNISRGRGGGAGSSAVMPAAGTSSSMTVTKFSSSSPSGTRKGLSYSTVPTERKTSLSLHT
GGYEGSSSGNSSPEYIKKEYVSASVATRGRAQTRESEIRARLQSASPSTRWTELDDVKRL
LKGSRSGSISPPRSPTNTLPIPKKASVDTRHESQSGYDGTVLDAGFSGYYTNPNNLSYTT
LQQPSSPTGGMQNNLTLSSSALSSAAYGMYNNLSTSGGALMANGISAGPVYGAQKNVGSA
GLATTVTTFPSSPITADDVFVKDGKFIAIAKENVAAKKESERLIMSKNTGKLFTTSTTSA
GADSEDSLKREKKMISSTTESTMTASRAATKDKSTYAEIRKDESDDAGLGFCSCCSWWKW
LLALILGLLLLLGLLCGLIALGEEVRKLKARVDAIDGGESAVSARISSFSASSAVNIIDP
LESSYAERIPGVRADNTINLGSASAAQDPVVLQRAIQQILRSELQSDTIRASLATSLKGE
RGEPGPKGDQGPAGVKGDAGFPGIPGPPGLIGHPGQEGPRGPKGSAGESGNDGLPGLRGR
EGPVGHRGEPGPPGIGEKGEKGSFGDVGAPGLAGPPGPVGPKGDAGAQGVPGLPGAPGPQ
GFRGDSGDPGPKGDKGPAGPPGVKGDQGERGPRGATGEPGQVGPTGPPGEKGLKGSAGAP
GPDGVKGIRGDQGPIGLPGARGPSGPPGDAGIPGAPGLQGPPGLPGTPGQPGAKGEPGEP
GRVISAGANTNTVGVPGPPGSPGAPGPAGPSGLSGPIGPAGLPGPPGSKGDKGDKGEDGK
PGVSESAGKKAPSEPGPPGPPGLPGPPGNDGQPGIGQPGPPGEKGKPGSFVPTSETFFAG
PPGPPGPIGPKGSQGDIGPQGFPGHPGLPGEPGIGIPGQPGTPGPRGEQGPEGPPGPQGP
QGPMGPIGPEGPKGDAGVPGAPGIPGYSYGGGSRSAPGPPGPPGPPGPPGAPGSSGGGSP
DVVQQISDYLRSEPIREYLTGPPGPPGPPGPTGSGSEDSLANRVIEYLQRDEVRQYLIGP
PGPPGPPGVPGGYGFNTQEDAGRVLRLLNDAGFTGLPGPPGPPGPQGPPGGSGGLVSYAV
NKNQPQIRAEPQEYIKRHPSSDENLDYAVIAKKVSDYIKSHGLLQGQDGVIGSPGSRGPP
GPRGPPGPQGFSGLNGLPGPPGISPELPYSNMTAIIDYIRDHRMIGPPGITGQKGEPGYS
GPVGPKGDRGLKGLPGNPGIPGMKGEKGEASYVTRRRRSTVI
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctaaccacaaccaagattgtgaaagcagaggggggatctggaggatctgga
aaagaaatccaaagacacacagaaactgtaacaaccacaagactgtcatctctacctcca
aagggcaacagcagctccgtgagcagccaacaggtactgacctccactgtgaccagctca
ggctctggaggagcttcaggaggagctgttctggtggagaagaagatcatcacccagagc
agtgctgaaggaggtgcttcctcctcctcgtctggaagttcaggcagcagcagttcagga
gcaggatctgtgataagtggatttgatgaaatatatcgcgtaaccggaccgattattagc
tctacagttaaaagttctagctctgcagttaaaagctctagcagtgtctctacttccatc
acaacagtaggtggttcctcagcaacaggtggagatctttcctctggatacgggtgcatc
tcctcctctgaggttgtgtctggttcttcaggcggttctgttagtgtttctggaggcagt
atgaacatatccagaggtagaggaggtggcgctggctcctctgcagtcatgcctgccgca
ggaacctccagttccatgactgtgaccaagttcagctcctcgtcgcctagtggcacaagg
aaaggtttgagttacagcacagttcctacagagaggaagaccagtctgagccttcacact
ggaggatatgaggggagctccagtggcaattcttcccctgaatacataaagaaagaatat
gtttcggcaagtgttgccactagaggacgcgctcaaacacgagagagtgagatcagagcc
agattgcagagtgcctctccctccactagatggacagagctggatgatgtgaagagatta
cttaagggaagtcgctcggggagcatcagtccacctcgctctcccaccaacactctacct
atcccgaaaaaagccagtgtggacacccgtcatgagagccagtcaggttatgacggcaca
gtcctggatgctggattcagcggatattacaccaacccaaacaatctcagttacaccaca
ctgcaacaaccatcatcacccacaggtggcatgcagaataatctgaccctcagctcatct
gccctcagtagtgcagcatatgggatgtataataacctgtcaacatctggtggtgcactc
atggctaatggaatcagtgctggcccagtgtatggggcacagaagaatgttggcagcgct
ggattggccaccactgttactacttttcccagcagccctatcaccgctgatgacgtgttt
gtgaaagatggcaagtttattgcgattgcaaaagaaaatgtagcagctaagaaagagagt
gagagactgatcatgtccaaaaacactggcaaactgttcaccacttccaccaccagtgct
ggagcagattctgaagattcgctcaagagggagaaaaagatgatctccagcactacagaa
tccacaatgactgcttccagagccgcaacaaaagacaagtcaacctatgcagagatccgt
aaagatgagtctgacgacgcaggactagggttctgttcctgctgctcgtggtggaagtgg
cttctagcactgatcttaggtcttctccttctgctgggactcctctgtggtctcatcgca
ctgggtgaggaggtccggaagctgaaggctcgtgtggacgctattgatggcggagaaagc
gcagtctctgctcgaatcagtagtttttccgcctcctcggctgtcaacatcattgatcca
ctggagtcttcatacgctgagcgcatccctggcgtccgtgccgataacactataaacctg
ggttcagcatctgctgcacaagaccctgtggttctgcagagggccatccaacagatcctc
agatctgaacttcagtcggacaccattagagcttcactggcaacttcacttaagggtgag
agaggagaacctgggcctaaaggagaccaaggacctgctggagtgaaaggtgatgcaggg
tttcctggaatcccaggtcctcctggtctcattggtcaccctggacaggaaggtcctcga
ggacccaaaggaagtgcaggtgaatcaggaaatgacggtttacctgggctgaggggtcga
gaggggccagtgggtcacagaggagaaccaggacccccaggaattggagagaaaggagag
aaaggttcttttggcgatgttggtgcacctgggctagcaggaccaccaggccctgtggga
cccaaaggtgatgcaggtgcacaaggcgtaccaggtcttccaggagctcctggaccacaa
ggcttccgtggagactctggtgatcctggacccaagggtgataaaggacctgctgggcca
cctggggtcaaaggcgatcaaggagagcgaggtccacgtggtgccactggtgagccaggt
caggtcggaccaacagggcctcctggtgagaaaggtcttaaaggatcagcaggtgctcct
gggccagatggtgttaaaggaattcgaggggatcaaggtccgattgggttgcctggagct
cggggaccctcagggcctcctggagatgcaggaataccaggtgcaccaggactccaagga
ccaccaggtttgccaggtactccgggccagccaggagctaaaggtgagcctggtgagccc
ggaagagtcatttctgcaggcgctaatactaacactgtgggtgtacctggaccccctgga
tctcctggagctccgggtcctgctggaccatctggactatcaggtcctattggtcctgct
ggtcttcctggtccacctggttcaaagggagataaaggagacaaaggagaagatgggaag
cctggagtctctgagagtgcagggaagaaagctccttctgaacctggtcctcctggccca
cctggtctgccaggaccacctgggaatgatggacaaccaggtattggtcaacctggtcct
cctggtgaaaaaggtaaaccaggaagctttgtacccacttcagaaaccttctttgctgga
ccacctgggcctcctggacctattggaccaaagggatcacaaggtgatattggtcctcaa
ggcttccctggccatcctggattacctggagaacctggaatcggtattccaggacagcca
gggacaccaggaccacgtggagaacaaggtcctgagggtccaccaggaccacagggacct
caaggaccaatgggtcccatagggccagaaggtccaaaaggtgatgctggagtcccaggg
gcccctggcattccaggatactcctacggtggaggatccagaagcgctccgggaccacca
ggtccacctggacccccagggcctcctggagcacccggttcatcgggtggtggctcacca
gatgttgttcaacagatttcagactaccttagaagtgaacccatcagagaatacctgact
ggacctccaggcccacctggaccaccaggacctaccggatcaggctctgaagattcgcta
gctaaccgtgtcattgaataccttcaaagagatgaagtgaggcagtacctgattggtcct
ccagggcccccaggacccccaggtgtgccaggtggatatggctttaacactcaggaagat
gctggacgagtgctgagactgttgaatgatgctggtttcacaggtctgccaggacctccc
ggtcccccaggacctcaaggaccaccaggaggctctggaggactagtgtcttatgctgtt
aacaaaaaccaaccacaaatccgtgcagagcctcaggagtatatcaaaaggcacccaagc
tctgatgagaatttggattacgcagtcatcgctaaaaaggtttcagattacattaagtct
catggcctgttacaaggtcaagatggtgtgatagggagtccaggttcacgaggtccacca
ggtccacgaggtccaccaggtccacaaggattcagtggcctcaatggactccctggacct
ccaggaatcagtccagaacttccttactccaacatgactgcaatcatagactacatcaga
gaccaccgtatgattggaccaccaggtataacagggcagaaaggggagccgggatattct
ggaccagtaggaccaaaaggtgacagaggactcaaaggtctaccaggtaacccaggcatc
ccaggaatgaaaggagagaagggtgaggcttcatatgtcactcggaggaggaggagcaca
gtcatttag
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