Sinocyclocheilus grahami (golden-line barbel): 107584727
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Entry
107584727 CDS
T04918
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgh01002
]
107584727 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107584727 (usp47)
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107584727 (usp47)
Peptidases and inhibitors [BR:
sgh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107584727 (usp47)
Ubiquitin system [BR:
sgh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107584727 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
TFIIA
Motif
Other DBs
NCBI-GeneID:
107584727
NCBI-ProteinID:
XP_016126928
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
MISSLADAQTAYEKTVALLLNSAYAFVHLQIESAAEEPRVLCIVQDTTSAKTINERLTLN
LPASTPVNKLYEDVAHKAGYVNGTFYLTWANTGAMAPLDQASEMSLVLSGFEAGKRNFLQ
LTDKDGEQPQITSDESGTADSSGVDDSSQGRFIGPLPRDGTVGCSSDYSSPSYSYSSILN
KSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVISIPYQLKRLFV
LLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLY
QGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETLDGPNQ
YFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFI
DVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDAVDEGICLDNTSSAERVLKPKSS
LTFELFSVMVHSGSAAGGHYYACIKSFSDSQWYSFNDQHVSKITQDDIRKTYGGSSGSRG
YYSSAFASSTNAYMLMYRLKDPSRNAKFLEVEDFPEHIKRLVQRERESEEQEKRQREIER
NTCKIKLFCIHPVKMMMTENKLEVHKDKTLREATEMAYKLMDLDGVVPLDCCRLVKYDEF
HEYLERSYEGEEDMPMGLLLGGVKSSYMFDLLLEIRRPDQMFQPYKPGEVMVKVHVVDLK
SESIAAPVSVRAYLNQTITEFKQLIAQATGLCAETMRVVLERCYNDLRLLYVPNKTLKAE
GFFRSNKVFVESSDSTDHQAVFTDSVLWKLLDRHGNTIRLFVSLPEQSPGSLANRTSCPK
ASADSEDSFDGAKGSRKSVEAILEESTEKLKNLSLQQQQQQQQHQQQSSSTSDSQKSSEH
SDFEHIESPAQEPDAASQPSQTENSTRAASDTENQFPSEERSDSDVNNDRSTSSVDSDIL
SSSHSSDTLCNADSGPLPLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDEN
GKSKAEAQYLYFKAEPYSQEDGSGEGQKCLLVHVDKRITLAAFKQNLEPFVGVPSTQFKV
FRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNDPEPCKFLL
DTVFAKGMTVRQSKEELLPQLKDQCKLDISIDRFRLRKKTWKNPGTVFLDYHVYEEDINI
SSNWEVFLEVLEEPERMKSMSQLAVLTRRWCPAQMKLEAFREVVLESSSVEELKEKLSEL
SGIPLENLEFAKGRGTFPCDMSVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRVSTE
ELMELSEEERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPTKDPGQD
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgatcagttctttagcagacgctcagacagcgtatgaaaagacagtggctttgctttta
aactcggcatatgcgtttgtgcatttacagattgaaagtgcagcagaggagccaagagtg
ctgtgtatagtgcaggacaccaccagtgccaagaccatcaatgagaggctgacgctcaac
ctgcccgcctccacccccgtcaacaaactctacgaggatgtggctcacaaggctggatat
gtgaacggcactttctacctgacctgggctaacactggtgccatggctcctctggaccag
gccagtgagatgtccctggtgttgtccggttttgaggcggggaaaaggaatttcctgcag
cttacggacaaggacggggagcagcctcagatcacttcagatgaatctggcacagcggac
agcagtggtgttgatgacagctctcagggtcgcttcatcggacccttaccgcgggacggg
actgtgggctgcagcagtgactacagcagccccagttactcgtactcctccatacttaac
aaatcagagacaggttatgttggtttggtcaaccaagcaatgacctgttacctgaacagc
ctcctgcagaccctgttcatgacccctgagttcaggaatgcactctacaattgggagttt
gaggagtcagaggaggatccggtcatcagtatcccgtaccagctcaagaggctgtttgtg
cttctgcagaccagtaagaagcgtgccatcgagaccacagacgtgacccgcagctttggc
tgggacagcagtgaggcctggcagcagcacgacgtccaggagctttgcagagtcatgttt
gatgcactagagcagaagtggaaacagactgagcaggctgacctgatcaaccagctttac
cagggcaaactgaaggactatgtgcgctgtttggagtgtggctatgagagctggaggatt
gacacgtacttggacattcctctggtcatcaggccctttggggccagccaggcttttggc
agcgtggaagaagccctgcaagctttcatccagcctgagactcttgacggtcccaaccaa
tacttctgtgagcgctgcaaaaagaaatgtgacgcccgcaagggtctgagattcctccat
ttcccatacctgctgactctgcagctgaaacgcttcgactttgattacaccactatgcac
cgcattaaactcaatgaccgcatgaccttcccagaggagctggacatgagccccttcatc
gacgttgaggatgagaaatcacctcagacagagagctgcactgacagtggggcggagaat
gaaggaagctgccacagtgaccagatgagcaatgatttctccacggatgatgctgtggac
gagggcatctgtctggataacaccagcagcgcagagcgggtgctcaaaccaaagagctcc
ttgacctttgaactcttctcagtcatggtgcattctgggagtgctgcaggtgggcactac
tacgcctgcattaagtccttcagtgacagccaatggtacagcttcaatgaccagcacgtc
agcaagatcacgcaggatgacatccggaagacatatggcggatcctcagggagcagaggc
tattactccagtgcctttgccagctctacaaatgcatacatgctcatgtacagactaaaa
gacccctccaggaatgcaaaattcctggaagttgaggacttcccagagcacataaagaga
ctggtgcagcgagagagagagtctgaagaacaggagaagaggcaaagagagattgagcgc
aacacatgcaagatcaagctcttctgcattcatccagtgaagatgatgatgactgagaat
aagctggaggttcacaaggacaaaactctcagagaagcaacagaaatggcatacaagctg
atggatcttgatggagtggtgccactggactgctgtcgattggtgaaatacgatgagttt
cacgaatatctagaacgttcgtatgaaggggaggaagacatgcccatgggtctgctgctc
ggcggggtcaagtcttcatacatgtttgacctactcctggagatccgcaggcctgaccaa
atgttccagccctacaaacctggagaggtgatggtgaaggtccatgtggtggatctgaag
agtgagtctattgctgctccagtcagtgtcagggcgtatctcaaccagactattacagag
ttcaagcaactcattgcgcaggccacggggctttgtgcggagactatgcgtgtcgtctta
gagcgctgctataatgaccttcggcttctttatgtgcccaacaagactctgaaagcagaa
ggtttcttcaggagtaacaaggttttcgtggagagctcagactcaacggatcatcaggct
gttttcactgactctgttttgtggaagctcctggatcggcacgggaacacaatcagactg
tttgtctccttgcccgagcagtcgccaggctctttggccaacagaactagttgccccaaa
gctagcgctgactctgaggactcttttgatggggcgaagggcagcaggaagtcagtggaa
gccattcttgaagagagcacagagaagctaaagaacctttctttacaacagcaacagcag
cagcagcagcatcagcagcaatcctccagcaccagtgacagtcagaagagctcagaacac
agcgacttcgagcacatcgagtcaccagcacaggagccggacgctgcctcgcagccttcc
cagacggagaactccacacgggccgcctcagacacggagaaccagttcccctcagaggag
cgctcggactcagatgtcaataacgaccgcagcaccagctcggtggacagtgacatcctg
agctccagccacagcagcgacacgctgtgtaacgcggacagcggcccgctcccgctggct
aacggcctcgactcgcacagcatcaccagcagccggcgctccaaagcacacgaggggaag
aaggagacgtgggacacggcggaggaggactctggcacggacagcgagtacgatgagaac
ggcaagagcaaagctgaagcccagtacctgtacttcaaagcagagccatactctcaggag
gacggatctggagaaggacagaaatgtttacttgtccatgttgacaagaggatcacactg
gcagcgttcaaacagaatctagagccgtttgttggcgtcccctccactcagtttaaagtc
ttccgggtttatgccaacaaccaggagtttgagagtgtgcggctcaatgagacgctctcc
tctttctctgatgacaacaagatcacgattcgattgggacgtgcactgaagaaaggagaa
tacagggtgaaggtgtaccagctgctagtcaatgacccagagccctgtaagttccttttg
gacactgtgttcgctaaaggcatgactgttcgacagtctaaggaggagttgctgcctcaa
ctcaaagaccagtgtaaactggacatcagtatagataggtttagactcaggaagaagacc
tggaagaacccaggcacagtgtttctggattatcacgtctatgaggaggacatcaacatc
tccagtaactgggaggtgttcctagaagtccttgaagaaccggagcgcatgaagtccatg
tcccagttagcggttctgacccgtcgctggtgcccagcccagatgaagctggaggccttc
cgggaggtggtgctggagagcagcagtgtagaggagctcaaggagaagctaagtgaattg
agtggaattcctcttgagaacttggagtttgccaagggacgaggaacttttccttgtgac
atgtcagtgttggagatccatcaggatttagattggaatcctaaagtctccaccctcaat
gtctggccactctacatctgtgatgatggcgccgtgatcttctacagggtcagcaccgag
gagctcatggagctgtctgaggaggagcgcaatgaactgatgaagaaggagagcagccgc
ctgctgaagacgggccaccgcgtcagctactccccccgcaaagagaaggccctcaaaatt
tacttagacggagggcccaccaaagaccctggacaggactga
DBGET
integrated database retrieval system
