Sinocyclocheilus grahami (golden-line barbel): 107592030
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Entry
107592030 CDS
T04918
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107592030 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sgh04030
]
107592030 (smo)
G protein-coupled receptors [BR:
sgh04030
]
Frizzled / Smoothened family
107592030 (smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
107592030
NCBI-ProteinID:
XP_016136905
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MYRLRNAPRCWAVIQPLLCAVYMPKCENGKVELPSQHLCQATRKPCSIVERERGWPNFLK
CENKEQFPKGCQNEVQKIKFNTSGQCEAPLVKTDIQASWYKDVEGCGIQCNNPLFTEDEH
SDMHNYIAIFGSITLLCTFFTLATFLADWKNSNRYPAVILFYVNVCFFIGSIGWLAQFMD
GARKEIVCKSDDTMRLGEPSSTETLSCVIIFVIVYYSLMSGVIWFVMLTYAWHTSFKALG
TTHLPLSGKTSYFHLVTWSIPFILTVAILAIAEVDGDSVSGICFVGYKNYRYRAGFVLAP
IGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVFITF
GCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTNKPIPECAIKNRPSLLVEKINLFSMFG
TGIAMSTWVWTKATILIWKRTWFRIIGRSDDEPKRIKKSKMIAKAFSKRKELQKDPEKEL
SFSMHTVSHEGPVAGINFDLNEPSMEMSSAWAQHVTKMVARRGAILPQDISVTPTGTPVP
PPEERNKLWMVEAEISPEMMKRKKKKKKRRKEIRPTGPAADEGKTAYHRKEFGPSSVPRL
PKLPGHQSLVANLWEQQRQRQEEQDMLPGAFPEFRPSCPLPYQERYGGLGYLCNKPSSLP
LASPLTLRDSMQDDSDGFQQSSWKPNGVFRHLGKEASVMGAGRTAVVPRVDGRRGVPIHS
RTNLMEAELLDADSDF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtaccggttgagaaatgctcctcgctgttgggccgtcattcagccgttgctgtgtgct
gtttacatgccaaaatgtgagaatggaaaggtcgaattgcccagccagcacctgtgccaa
gctacacgcaaaccttgcagtattgtggagcgggagaggggctggcccaacttcctcaag
tgtgaaaacaaggagcagttccctaagggttgccagaatgaggtccagaagatcaaattc
aacacttcaggacagtgtgaggctcccttggtcaaaacagacatccaggcaagttggtac
aaggacgtggaaggttgtgggatccagtgcaacaatcccctgttcacagaagatgagcac
tcggacatgcataactacattgccatcttcggctccatcactctcctatgtacattcttt
acgctggccacatttctcgccgactggaagaattccaaccgttaccccgctgtgatcctg
ttttacgtcaatgtatgtttctttatcggaagtattggatggctcgctcagttcatggat
ggagcccgcaaggagattgtgtgcaaaagcgacgacactatgcggcttggagagccatca
tccaccgagacgctgtcatgcgtgattatcttcgtcattgtgtattattctctaatgtct
ggagttatttggtttgttatgctcacttatgcctggcacacatcgtttaaagccttggga
accacccatctgcctctgtctggaaaaacatcctattttcacctggtcacatggtctatt
cctttcatactgacagttgctatactggccattgcagaggtggatggagattcagttagc
ggcatttgctttgttggttataagaactacagataccgtgcagggtttgttctggctcct
atcggggtggtccttgtcgttggcggctatttcctgatacgaggggttatgacattgttt
tccattaaaagtaaccatccggggctgctcagtgaaaaagctgctagtaaaatcaatgaa
accatgctgaggcttggtatatttggattcttagcctttggttttgttttcatcacattc
ggctgccatttctatgactttttcaaccaagctgagtgggaaaaaagcttcagggaatat
gtactatgtgaggctaatgtcaccatagctcatcagaccaacaagccgatcccagagtgt
gccatcaagaacaggcctagtctgctggtggagaagatcaacctcttctcaatgttcggt
acaggcattgcaatgagcacatgggtctggacgaaggccaccatccttatttggaaacgc
acctggttcagaatcattggaagaagtgacgatgagccgaaacgcattaagaagagtaaa
atgattgccaaggcattctcaaagcgaaaagaactgcagaaggatccagagaaagagctg
tccttcagcatgcacaccgtttctcatgagggacctgtggcgggtatcaactttgacctg
aatgagccatcaatggaaatgtcttctgcgtgggcccaacatgtgaccaagatggtggct
agaagaggggcaattttaccacaggatatctcagtgacgcccaccggaacacctgttccg
cctccagaggaaagaaacaaactttggatggttgaagcagaaatttctcctgaaatgatg
aaaagaaagaagaagaagaaaaagagaaggaaggaaatacggccaacgggtcctgcagcg
gacgaagggaagactgcctaccaccggaaggagtttggccccagctcagtcccccgtctc
ccaaaacttccaggtcaccagagtctggtggctaacctgtgggagcagcagcgacagcgg
caggaggaacaggatatgctacctggagccttccctgaattcaggccttcatgtcctctt
ccttaccaggagagatatggtggtttgggatatttatgcaataaaccctccagcctcccc
cttgccagtcccctgacgctaagagatagcatgcaagatgattcagatggcttccagcaa
tcatcatggaaacctaatggggttttccggcaccttgggaaggaagcttccgtgatgggt
gctggcaggactgccgttgtgccacgggtcgatggcaggaggggtgtaccaatacactcc
agaacaaatcttatggaggctgagctactggatgctgactcagatttttaa
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