Sinocyclocheilus grahami (golden-line barbel): 107601217
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Entry
107601217 CDS
T04918
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107601217
03036 Chromosome and associated proteins [BR:
sgh03036
]
107601217
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107601217
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107601217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
UBA
RRM_1
DDE_Tnp_4
RRM_occluded
DUF4718
THOC7
Motif
Other DBs
NCBI-GeneID:
107601217
NCBI-ProteinID:
XP_016148794
LinkDB
All DBs
Position
Unknown
AA seq
1850 aa
AA seq
DB search
MEEKKKKTQEEKKKKEAAQKKAAEQKTKVPDSAKPSPTPPPPTNPSTATNPSVPSASSST
GGNGKRAPSGNQQQQPAAPRYPPREVPPRFRQHEHKQLLKRGQPLPAGSTALVQPVSANP
ASQPFFCQTHPELPPQSGLAAQYENISPNRSATTASTNSCSGWDPLIIDKRDTEAWPSIS
CKESHAPAGCPLDTESISDISSMSMATGAGQQGHFSANHPSKANASHSGGLLSSQGGAGR
GWGSGPSPASGGEGKNEVSSTSVGARCWGSSNFNLNLNPNANPSAWPVLGHEGTGMGGGS
SGGSNPPPPNLCSPPGTLPSQGPSSSGSIGGANGNSAGNGGSGNGSTSWGSIVPSDSSEP
HSTPSTNVSFSSEPQNLNTDGPNHTKQEPRSPGHSLPNWGVGPAGMGSFVQNPGGASQVN
GDEEPVWGNGDAKSGGGSKDSGWDSGSSWGQGGASGTSGWGQAASTGDWGKHSNSEAKGW
DSSGSPTQEQQLNSWVRGANAPASEGSSDSMECHPRRRVCSSRDEASPILPTQDMDPRVL
CNTGWGQTPVRQHTSWETEEAARANCKNDVGTESWGSSSNAANVGPTPTSSSANPNSGTT
SRPDSGGKNEGPCPSTGAAPGWGTTMPSPQASSGWADPTSNKKPSSGPGSWGSTPAGGPG
GNLQKSGQTWGSEEKSPTWEDSHAKAKPQGWTEVPKTSHGWGNGPGGESGSGGEWGEPGN
GKKNGPSSSTWEGEGTGWNESSRRWGKPAPGVGGNWGDAQNSSVPSQGWNNKPQEGTNGN
SGSGSMGSWGGPNSVKRSGSGWGGGNGGGVKPDHTGEPTGWEEPSPHSIRRKMEIDDGTS
AWGDPSSCNKTVNLWDKNNPGMQGKPGPGDANNVPSNHHHHHHPHHNQPPMQTHSHGGPN
SNNNHISPDNAGPHQTGPPHNRTTPMNPGWGEMTKVHSKPEPSWVEAAAPAASVDNGTSA
WGKPPGGWGDNGPEVYGRGNGPPGSAPCKPAPKSMQDGWGGGEDMGLSAGQWEQDEGDMW
NSTASQESNSSCSSWGNPPKKGPPKGKVPNKQDDTWIMNHLIKQLTDMGFPRDPAEEALK
SNNMNLDQAMSALLEKKTELDKRGMGISDYNNGLVNKPMGCRPSVISKESSSDRPPFLDK
DAGLADDAQTSPFMPSPSLKLPLGSAALPGQSLGVAMQNLNNRQMQSGVFGSGAAQARAL
QQQPPPQPSVPPLNSSQPSLRAQVPQFFSPQVQAQLLQFAAKNIGLNPALLTSPINPQHM
TLLNQLYQLQLAYQRLQIQQQMLQAQRSVSGPIRQQEQQVARTINNMQQQIQQHQRQLAQ
ALLMKQQQQQPPASHPGLHPSAGKSTLDTFPAHPQASSLSVSDLQTKEPQSSPNSFSPYT
ISGLNPNMNVNCMEVGGLSIKDSPQPQSRLSQWTHPNSMENLSGNSSPMEANFSKHGAIS
TGPSLGPPSKPPLDDSYSPYNLIPSSESPASPLAPHDSWGQGKNTNDKISNGTNVTWPPG
DDTQEIEGVNVPIMLLGDPAYPLLSWLMKGFPDTGNLSREHRRFSYRLSRACLTVKCAFG
QLKGEVEMFAEENGNMYITGSTGKLSDMKSTWSPGPISHTQASLSHELWKVPQGPRNSTA
PARPPPGLTNTKPSSTWGGNTLGLVAGWSSSYSSVGTTWSTDSSSRSTSWLVLRNLTPQI
DGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAG
EEEVNRFFAQGQSLTPTTSWQANPSSNHTRLGGGGTPATHPIGHWNSSSLGGGAGGMGSG
GKVSNELLWGGVPQYSSLWGPPSAEDGRVVCSPTPINTLLPGDLLSGESM
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaacgcaagaggaaaagaaaaagaaggaagctgctcagaaa
aaggctgctgaacagaaaaccaaagtgccagactctgccaagcccagccccacccctcct
ccccccaccaaccccagcaccgccaccaacccgtctgtgccctcagccagcagcagcact
ggtggcaatggcaagcgcgcaccctccggcaaccaacagcagcagccggcagcccctcgc
tacccgccccgagaggtgccccctcgtttccgtcaacacgaacacaagcagctactgaag
cggggccaacctctgcccgccggaagtacagctcttgtgcagccagtgtccgccaaccct
gcgtctcagcccttcttctgccagacccacccagagctgcccccacagagtggcctggca
gcccagtatgagaatatatcccccaatcgcagtgccactacagcctctaccaacagctgc
agcggctgggatccactgattattgacaagcgcgatacggaggcgtggccttccatttca
tgcaaagaaagccacgcccctgcaggatgccccttggacactgaaagtatcagtgacatc
agcagcatgagtatggccacaggagctggccagcaaggccatttctccgccaatcacccc
agcaaagccaatgccagccactcaggaggtctactctctagtcagggtggggccggcaga
ggctggggctctggcccgtctcctgccagtggaggagaagggaaaaatgaagtctccagc
acatcagtgggagccaggtgttggggctcctctaactttaacttgaacttaaaccccaac
gctaacccctctgcctggccagttctgggacatgaagggaccggcatgggtggcggcagc
tctggaggaagcaaccctcctcctcctaatctctgtagcccacctggcactctgcccagt
cagggccctagcagcagtggcagtataggtggtgccaatggaaattctgcaggtaatggt
ggcagtggcaatggcagcacctcatggggtagtattgtgcccagtgactcctcagagcca
cactccaccccatccacgaatgtgtctttcagctccgaacctcagaaccttaacactgat
ggaccaaatcacactaagcaagagcccagaagccctggccacagcctgcctaactggggg
gttggacctgcaggcatgggctcgtttgttcaaaatccaggaggagcctcacaggtcaac
ggggatgaagaacctgtttggggtaatggagatgccaagtctggtggtggctcaaaagac
tctggttgggactcagggagcagctggggacaaggaggggcctcaggcacttctggatgg
ggacaagctgcctcaactggagactggggtaagcattccaacagtgaggccaaaggatgg
gattcctcaggctctcccacccaagagcagcagctcaactcttgggtccgtggggccaat
gccccagccagtgagggaagcagtgacagcatggaatgtcatcctcgcaggagggtctgc
tcatcaagagatgaggcttcccctattctgcctacccaggatatggaccctcgggttcta
tgtaacacaggctggggacaaacaccagtgcgtcaacacacctcttgggagaccgaagaa
gctgcacgcgccaactgtaagaatgacgttggaactgaatcatggggctcgtcctcaaat
gcagccaatgtaggaccaacaccaacttctagcagtgccaacccaaactctggcactaca
tccagacctgactctgggggcaagaatgagggcccctgccccagtactggagctgcacct
ggatggggcacaaccatgccatcaccccaagctagctctggttgggcagatcctaccagc
aacaagaaaccttccagtggtccaggaagttggggcagtaccccagctggaggtccaggt
ggcaatctgcagaaaagtggtcagacttggggatcagaggagaagtctcctacatgggaa
gacagtcacgctaaagccaaaccacagggctggactgaggtgcccaaaacttctcacgga
tggggcaatggacctggtggagaaagcgggtctggaggagaatggggtgaaccaggaaat
ggaaagaaaaatggtccctccagctctacttgggagggagagggtaccggctggaacgag
agctccagaagatggggaaagcctgctccgggagtaggaggaaactggggagatgcacaa
aactccagtgtgccatcacaaggatggaataacaagccccaggagggcaccaatggcaat
agtggcagtggaagcatgggttcttggggaggtcctaactctgtaaagcggagtggctct
ggatggggaggaggaaatggtggaggtgttaaacctgaccacactggagagcccactgga
tgggaggagccctctccacactccatccgacgtaagatggagatcgatgatggtacctca
gcttggggtgacccaagcagttgcaacaagacagtcaatctctgggacaagaataaccct
gggatgcaaggcaaaccaggacctggcgatgccaacaatgtacccagcaaccatcaccat
caccatcatccccaccataaccagcctcccatgcagacccacagccatggagggccaaat
tcaaacaataatcacatttcccctgataacgctggcccacatcaaacagggccacctcac
aatagaacaacccctatgaatccaggatggggcgagatgacaaaggtccattcaaaacct
gagccctcatgggtagaggcagccgcccctgcagcaagtgtggacaatggcacttcagca
tggggtaaacccccaggtggctggggtgataatggccctgaggtctatggtcgaggcaac
ggacctcctggatctgccccctgcaaacctgcccccaaatctatgcaagatggctggggt
ggtggagaggacatgggcctgtctgcagggcagtgggagcaggatgagggtgacatgtgg
aacagcactgcatctcaagagagcaactcctcctgcagctcctggggcaacccacccaaa
aagggcccaccaaagggaaaagtcccaaacaaacaggatgatacttggataatgaatcat
ctcatcaagcagctgactgacatgggcttccctagagaccctgcagaagaggctctcaag
agcaacaacatgaacttggatcaggccatgagtgccctgttggagaagaagaccgaacta
gataaacgggggatgggaatctctgactacaacaacggccttgtcaataaaccaatgggc
tgcaggccttcagtcatctccaaagaatcctcctcagatcgtccccccttcttggacaag
gatgctgggctagcagatgatgcccaaacctcaccgtttatgccttctccgagcctgaag
ctcccattgggtagtgctgcactccctggccagagccttggagttgcgatgcaaaacttg
aacaacagacagatgcagagtggagtgtttggtagtggagcagcacaagcccgggccctg
cagcagcagcctcctccccagccgtcagtgccacctctcaactcgtcccagcctagtcta
cgcgctcaagtgcctcagtttttcagccctcaggttcaagcacagcttttacagtttgca
gcaaaaaacattggtctcaaccctgcacttttaacctcaccaataaaccctcagcatatg
accctgttgaaccaactttatcagctgcaactggcgtaccagcgtttacagattcagcag
cagatgttgcaggcacagcgcagtgtttctggccccatccgacagcaagagcagcaagtt
gcacgtacaatcaataacatgcagcaacagatccagcagcaccagcggcagctggctcag
gctctgctgatgaaacaacaacagcagcagccacccgcctcacacccgggcctgcatccc
agcgcaggcaaatcaactctggacacatttccagcccatccccaggcctccagcctctct
gtttccgaccttcagaccaaagagccgcagtcttctccaaactccttctcaccctacact
atttctggattgaaccctaacatgaatgtaaactgcatggaggtgggtggcctgtccatt
aaggactctcctcagcctcagtcacgcctgtcacagtggacacacccaaactccatggag
aacctctctggcaactcctctccaatggaggccaacttcagcaagcatggtgccatctct
acaggccctagtctgggtcccccaagtaagcccccgctggatgactcctacagtccctac
aatctgattcccagctccgagtctcctgccagccccctggcacctcatgatagctggggt
caggggaagaacaccaatgacaagatctccaatgggaccaatgtcacctggcctccaggt
gacgacacacaggaaattgagggtgtaaatgtccccattatgcttcttggagacccagca
tacccactcttgagctggttgatgaagggatttccagacactggtaatctgtctagagaa
cacaggcgcttcagctaccgtttgagccgtgcatgcttgactgtgaaatgtgcatttggg
cagctgaagggggaggtggagatgtttgctgaagagaatggaaatatgtatatcacggga
tctacaggaaagctatctgacatgaagtccacttggtctccggggcccatctcgcacacc
caggcttctctctctcacgagctttggaaagtcccacaaggaccccgaaactcgacggct
cccgcacggccgcctccgggcctgaccaacaccaagccctcgtccacgtggggcggaaac
accctgggcctggtggctggctggagcagctcctactcttcagtaggtaccacatggagt
acagacagctccagcaggagcactagctggttggttctgagaaacctcacaccacagatt
gatggttctacactgcggacactgtgcatgcaacacggcccgctcatcacattccatctc
aacctgacgcagggcaacgccgttgtgcgctacagttctaaagaggaggctgccaaagcc
caaaagtccctacacatgtgtgttctgggaaacaccactatactggcagagtttgctgga
gaagaggaggtgaaccgcttctttgcacagggtcagtccctcacgcccaccaccagctgg
caggccaaccccagcagcaatcacacacggctggggggcggagggacgccggccacacac
cccatcggccactggaacagcagcagtctgggaggaggagcgggcgggatggggtccggc
gggaaggtgagcaacgagctgctgtgggggggtgtaccgcagtactccagcctgtggggg
ccgcccagcgccgaagacggccgagtggtgtgcagccccaccccaatcaatacgctgctt
cctggagacctgctgagcggagagtccatgtga
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integrated database retrieval system
