Sphingopyxis granuli: SGRAN_1962
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Entry
SGRAN_1962 CDS
T04372
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sgi
Sphingopyxis granuli
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgi01011
]
SGRAN_1962
Enzymes [BR:
sgi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SGRAN_1962
Peptidoglycan biosynthesis and degradation proteins [BR:
sgi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SGRAN_1962
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GFIT
Motif
Pfam:
SLT
TPR_16
Motif
Other DBs
NCBI-ProteinID:
AMG74339
UniProt:
A0AA86GK25
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All DBs
Position
complement(2135260..2137041)
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AA seq
593 aa
AA seq
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MTRTITAVTAALLFSIAAGSAPALAADAGAPEMTAPPQTVPDILSSKQKAFYKQVLAAIR
GQRWAEAKTLLDGADQDAKGAPLSDFLRAELLLAAGSPRAEVADIMPLLARAPWLPQADR
LGRLAAKRGATDLPTLPPQTRLAWAGSAPRRVGADSVNDPVAASLARTIPDRIKNDDPAG
AEALLNAVIDQLSPDARAEWTQKVAWSYYIENDDANALRLALSCASGHNGWATQGAWVQG
LAAWRLRDYRTALVAFDRVGREAPDSELRAAGYYWAARAAIASGEPASVQQRLRAAAANE
ETLYGLLAAETLGIETGSQRENVRADRSAWRALEDLPNVRIAMAFAEIDEDQYAGDALKH
QARIGNPGQHGQLIGMAQALSLPETQLYLAHNTPGGRKLAAAARYPQPKWEPNGGWKVDP
ALVFAHTLQESRFQRAVVSPAGAYGLMQVLPGTARDVARWRGEAVATTDLRIPAVNMDFG
QSYLQYLSRDASTGGLLPKVIAAYNAGPAPVARWATEVRDNGDPLLFMESIPYWETRGYV
GIVLRNYWMYEAQQGKPSVSRAALAQGQWPRFPDGKDRVRLTHAAPTGLASAN
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaacgatcacggcggtgaccgccgctctcctgttttcgatcgccgcgggcagc
gcgcccgcactcgccgcggacgccggtgcgcccgagatgacggcgccgccgcagaccgtg
cccgacattctctcgtcgaagcagaaggccttctacaagcaggttctcgccgcgatccgc
ggccagcgctgggcggaggcgaagacgctgctcgacggggccgaccaggacgcgaagggt
gctccgctcagcgattttctgcgcgccgaactgctgctcgcggcgggcagtccgcgcgct
gaggtcgccgacatcatgccactgctcgcacgagcgccatggctcccgcaagccgaccgg
ctcggccgtctggcggccaagcgcggcgccaccgacctgccgacactgccgccgcaaacg
cgtctcgcctgggcaggcagcgcgccacggcgcgtcggcgccgattcggtcaacgacccg
gtggccgccagcctggcgcgcaccatccccgaccggatcaagaatgacgacccggcgggg
gccgaggcgttgctcaacgcggtgatcgaccagctctctcccgacgcgcgcgccgaatgg
acgcaaaaggtcgcctggtcctattatatcgagaatgacgacgcgaacgcgctgcgcctc
gccctgtcctgcgcttcgggccacaatggctgggcgacgcagggcgcctgggtgcagggt
ctggcggcatggcgactgcgcgactatcgcaccgcgctcgtcgccttcgatcgggtcgga
cgcgaagcgcccgacagcgaactgcgcgccgccggctattactgggccgcgcgcgcggcg
atcgccagcggcgagccggcgtcggtgcagcaacgcctgcgcgccgccgccgccaacgag
gaaacgctctacggtctgctcgccgccgaaacgctgggtatcgagacgggaagccagcgc
gagaatgtccgcgccgaccgcagcgcatggcgcgcgctggaggatctgcccaacgtccgc
atcgcgatggcctttgccgagatcgacgaagatcaatatgccggcgacgcgctgaaacac
caagcgcgcatcggcaatcccggccagcacggccagctcatcggcatggcgcaggcgctc
agcctgcccgaaacccagctttatctcgcgcacaacacccccggcggccgcaagctcgcc
gccgcggcgcgctatccgcagcccaaatgggagcccaacggcggctggaaggtcgatccg
gcactcgtttttgcgcacaccctccaggaatcgcggttccagcgcgcggtggtgagcccg
gcgggtgcttatggcctgatgcaggtgctgcccggcaccgcgcgcgacgtcgcgcgctgg
cgcggcgaggcagtggcgacgaccgatctgcgcattcccgcggtgaacatggatttcggc
cagagctatctgcaatatctgagccgcgacgcatcgaccggtggtctgctacccaaggtg
atcgccgcctacaacgccggtcccgcgcccgtcgcgcgctgggcgacagaggtgcgcgac
aatggcgatccgctattgttcatggaatcgatcccctattgggaaacgcgcggttatgtc
ggcatcgtgctgcgcaattactggatgtacgaggcgcagcagggcaaaccgtcggtcagc
cgcgccgcgctcgcgcagggccagtggccacgctttccggacggcaaggatcgggtacgc
ctgacccatgcggccccgaccggcctcgccagcgccaattga
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