Sphingopyxis granuli: SGRAN_4136
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Entry
SGRAN_4136 CDS
T04372
Symbol
ku
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
sgi
Sphingopyxis granuli
Pathway
sgi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SGRAN_4136 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgi03400
]
SGRAN_4136 (ku)
DNA repair and recombination proteins [BR:
sgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SGRAN_4136 (ku)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AMG76463
UniProt:
A0AA86L5S0
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All DBs
Position
complement(4546413..4547285)
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AA seq
290 aa
AA seq
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MPARAYWKGQIRLALVSIPVEIYPATRSGASVSFRQIHEPSGKPVKYEKVVPGIGPIDKD
DIVKGYELSKGSYVLLDEEEIEAVKLESKRTLELVQFVDAGEIDILYYEKPYYVVPADEL
AEEAYIVLREALRRTRKVGLGQLALRGEEQLVALRPCGKGLVLEVLRYADEVNRAANYFR
DVGAAKPDADLLDLAETLIDRKSGRFDASDYHNHYVDALKRLIAKKAKAKGRKVLEDVEE
PAAAREGSNVIDLMAALKASVDGRKSSPAARTKAPARKASTRRAPAKKRA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgcgcctattggaaggggcagatccggctcgcgctggtgtcgatccccgtc
gaaatctatccggcgacccggtcgggcgcaagcgtcagctttcgccagatccacgaaccg
agcggcaagccggttaaatatgagaaggtcgtcccgggcatcgggccgatcgacaaggac
gatatcgtcaagggctatgagttgtcgaagggcagttacgtcctgctcgacgaagaggag
atcgaggcggtcaagctcgaaagcaagcggacgctggagctcgtccagttcgtcgacgcg
ggcgagatcgacatcctctattatgaaaagccctattatgtcgtccccgccgacgaactg
gcggaggaagcctatatcgtcctgcgcgaggcgctgcgccgcacgcgcaaggtcgggctc
ggccagctcgcgctgcgcggcgaggagcagctcgtcgcattgcgcccgtgcggcaagggc
ctcgtcctcgaagtgctgcgctacgccgacgaggtcaatcgggcagcgaattatttccgc
gacgtcggcgccgcgaagcccgacgccgacctgctcgacctggccgagacgctgatcgac
aggaagagcggccggttcgacgcgagcgactatcacaaccattatgtcgacgcgctgaag
cggctgatcgccaagaaggccaaggcgaagggccgcaaggtgctggaggatgtcgaggag
cccgccgccgcgcgcgagggatcgaacgtcatcgacctgatggcggcgctcaaggcgtcg
gttgacgggcgcaagtcgtcgccggcggcaaggacgaaggccccggcgcgcaaggcttcg
acgcgccgcgcgccggcgaagaagcgcgcctga
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