Streptomyces goshikiensis: PET44_21765
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Entry
PET44_21765 CDS
T09307
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgk
Streptomyces goshikiensis
Brite
KEGG Orthology (KO) [BR:
sgk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgk03021
]
PET44_21765
Transcription machinery [BR:
sgk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PET44_21765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_23
HTH_24
HTH_Crp_2
HTH_10
HTH_AsnC-type
HTH_3
Sigma70_ECF
MarR
IF2_N
HTH_28
GerE
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WBY24216
LinkDB
All DBs
Position
complement(4887642..4888631)
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AA seq
329 aa
AA seq
DB search
MPVRGGDLPRVRHEVDGGIPEQQHARPHPADADAEYGFLDSAERRAGPMSDNQHDQPESP
EAAATAPVTPAPPVAAADPRDRSGARALFFELRELPEGSVERAELRNRLVRMHLPLVEHL
ARRFRNRGEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAV
RVPRRLQELRLSLTTATAELSQQHGRSPTVHELAERLGISEEEVLEGLESANAYSTLSLD
VPDTDDESPAVADTLGSEDEALEGVEYRESLKPLLEGLPPREKRILLLRFFGNMTQSQIA
QEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atcccggtgcggggcggggatctgccccgggtacggcacgaggtcgacggcggcatcccg
gagcagcagcacgcccggccgcacccggctgacgcggatgcggaatacggctttttggac
tcggcggagcgacgggcgggccctatgagcgacaaccagcacgaccagccagagtcaccg
gaggccgctgccacggccccggtgacaccggcgccgcccgtggcggcggcggatccgcgc
gaccgcagtggcgcgcgggccctgttcttcgagctgcgggagctgcccgagggctcggtg
gagcgcgcggaactgcgcaaccggctcgtccggatgcacctgccgctggtcgagcacctg
gcgcggcggttccgcaaccgcggcgagccgctggacgacctgacacaggtcgcgacgatc
ggcctgatcaagtcggtggaccggttcgaccccgaccgcggcgtcgagttctccacgtac
gccacccccacggtggtgggagagatcaaacggcacttccgcgacaagggctgggcggtg
cgcgtgccccggcgcctgcaggagctgcggctctcgctgacgacggccacggcggaactg
tcccagcagcacggccgctcgccgaccgtgcacgagctggcggagcggctcgggatctcc
gaggaggaggtgctggaggggctggaatcggccaatgcctacagcaccctgtccctggac
gtcccggacacggacgacgagtccccggcggtcgcggacacgctgggctcggaggacgag
gcgctggagggcgtcgagtaccgggagtccctcaagccgctgctggaggggctgccacct
cgggagaagcggatcctgctgctgcggttcttcgggaacatgacccagtcgcagatcgcg
caggaagtcggcatctcgcagatgcacgtctcccgcctgctggcccggaccctggcccag
ctccgggagaagctcctcgtcgaggagtag
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integrated database retrieval system
