Shewanella glacialimarina: FJ709_05465
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Entry
FJ709_05465 CDS
T07885
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00521
Streptomycin biosynthesis
sgla00523
Polyketide sugar unit biosynthesis
sgla00541
O-Antigen nucleotide sugar biosynthesis
sgla01100
Metabolic pathways
sgla01110
Biosynthesis of secondary metabolites
sgla01250
Biosynthesis of nucleotide sugars
Module
sgla_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FJ709_05465 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FJ709_05465 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FJ709_05465 (rfbC)
Enzymes [BR:
sgla01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FJ709_05465 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UCX04005
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All DBs
Position
1259731..1260279
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AA seq
182 aa
AA seq
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MNVIETNIAGVKIIEPKVFGDDRGYFCETWNQQQFETLVAGKPTHFVQDNHSKSVKGTLR
GLHFQRQQTQGKLIRVISGEIFDVAVDIRTDSPTYGQWVGVLLSADNKRQVWIPAGFAHG
FYVLSDFAECVYKCTDYYHPQSEETILWNDAHLDIKWPVNDAPLLSDKDQHGHLFKNIRP
LV
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgattgaaactaatatcgccggtgtaaaaatcattgagccaaaggtgtttggt
gatgacagaggctatttctgcgaaacctggaatcaacaacagtttgagacattagttgca
ggcaagccaactcattttgtgcaagataatcattctaagtcggtaaaaggcaccttgcgc
ggattacatttccagcgtcagcagactcaaggtaagttaattcgagtcatatcaggtgaa
atatttgatgttgccgttgatattcgcactgactcgccgacatatgggcaatgggttggg
gtgttgctttctgctgacaataaacgccaagtttggatccctgccggttttgcccacggt
ttttatgtactaagtgattttgcagaatgtgtttataaatgcaccgattattatcatcca
caatcagaagaaaccattttgtggaatgatgctcatctagatatcaagtggcctgtaaat
gatgcaccgttattatcggacaaagatcaacatggacacttgtttaaaaatattaggcca
cttgtttga
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