Scandinavium goeteborgense: A8O29_008375
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Entry
A8O29_008375 CDS
T06630
Symbol
ompC
Name
(Genbank) porin OmpC
KO
K14062
outer membrane protein N
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgoe02000
]
A8O29_008375 (ompC)
Transporters [BR:
sgoe02000
]
Other transporters
Pores ion channels [TC:
1
]
A8O29_008375 (ompC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
QKN81290
LinkDB
All DBs
Position
complement(1609051..1610196)
Genome browser
AA seq
381 aa
AA seq
DB search
MKRNVLAILVPALLLAGAANAAEIYNKDSNKLDLYGKVDARHQFSEDGGNDGDATYVRIG
FKGETQINNDLTGYGQWEYNIQANDTESSSNQSATRLGFAGLKFGEYGSFDYGRNYGVVY
DVEAWTDMLPVFGGDSYTYTDNFMVGRGNGMATYRNSDFFGLVEGLNFAIQYQGANEGEN
GVFDQEGTVNRSADGTSMRSDNGDGFGLSTTYDFGMGFSAGAAYASSDRTNEQQSGSTAG
GEKADVWTVGLKYDANNLYLAAMYAETRNMTPFGDIDELIANKTQNFEVTAQYQFEFGLR
PEISYLQSKGKDLTEDFVQGSNWNDKDLLKYVSIGANYYFNKNFSTYVDYKINLLDGDDD
FYSTSGISTDDIVAMGMIYQF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaatgtattggcaattctcgtgccggctttattgctggctggcgcagcaaat
gcggctgagatttataataaagacagcaataagctcgacctgtatggcaaagtcgatgcc
cgtcatcagttctccgaagatggtggcaacgacggcgacgctacctatgtgcgtatcggc
ttcaagggcgaaactcaaatcaacaacgatctgaccggctacggccagtgggaatacaac
atccaggccaacgacactgagagcagtagcaaccagtctgcaacccgtctgggctttgct
ggcctgaaattcggtgagtacggttcattcgattacggccgtaactatggcgtggtgtat
gacgtagaagcctggaccgatatgctgccggtatttggtggcgattcctacacctacacc
gacaacttcatggttggccgcggcaatggcatggcaacctaccgtaactccgacttcttc
ggcctggttgagggtctaaacttcgctatccagtatcagggcgcgaacgaaggagaaaat
ggcgtattcgaccaagaaggcaccgttaaccgcagcgctgacggcacttccatgcgtagc
gataacggcgacggcttcggtctgtctaccacttacgatttcggtatgggcttcagcgcg
ggagccgcttatgcctcctctgaccgaactaatgaacagcaaagcggcagcacagccggt
ggtgagaaagccgatgtctggaccgttggactgaaatacgatgcgaataacctctatctg
gccgcgatgtatgcagaaacccgcaatatgacaccgtttggtgacattgatgaactcatc
gccaacaaaacccagaactttgaagtcactgcacaataccagttcgaatttggtctgcgt
ccggagatctcttacctgcaatctaaaggcaaagacctgacagaagatttcgttcaaggc
agcaactggaacgataaagacctgcttaaatatgtctctattggtgcgaactactacttc
aataagaacttttccacctatgttgattacaaaatcaacctgctggatggcgatgatgac
ttctatagcacatcgggcatcagtactgatgacatcgttgccatgggcatgatttatcag
ttctaa
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