Sphaerochaeta pleomorpha: SpiGrapes_0551
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Entry
SpiGrapes_0551 CDS
T01673
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
sgp
Sphaerochaeta pleomorpha
Pathway
sgp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SpiGrapes_0551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgp03021
]
SpiGrapes_0551
Transcription machinery [BR:
sgp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SpiGrapes_0551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AEV28402
UniProt:
G8QXA1
LinkDB
All DBs
Position
complement(599080..599964)
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AA seq
294 aa
AA seq
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MMSTKQNMLNNNDDRYAYDDANILTMYLKEINRIPLLTNEEEFKLAKRVQQGDEFARKRM
IESNLRFVVNVAKKYQNQGIPLIDLIDEGNIGLMTALEKFDPDKGYHFISYAVWWIRQSI
MKAICEKSRAVRLPLNRTNELLQIQKAQKSLMHTKSTEDPTMEEIGELTGLDPSHVADLL
AISREMVSLDAPVFNDNGNSNVGDFVEDTGRSPEDSLLEGSLKADISTVLSTLSDKERDI
IEMRYGLEGKAPMSLKEIGELYNLTKERIRQIEKKALERLKNPSRSRLLESYTA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtactaaacaaaacatgctgaataacaatgatgatagatatgcctatgacgat
gccaatattcttacaatgtatttgaaggaaatcaacaggattccccttttgaccaatgaa
gaagagttcaaactcgcaaaacgggtacagcagggtgatgagtttgccaggaagcggatg
attgaatcgaaccttcgcttcgtagtgaatgttgcgaagaaataccagaaccagggaatt
cccctcatcgatttgatcgatgaagggaatatcggtttgatgacggcactggagaagttt
gaccctgacaagggctatcacttcatcagctacgccgtgtggtggatcaggcagtcaatc
atgaaggcaatctgtgagaagagtagggctgttaggctcccgctcaacaggaccaatgag
ttgctgcaaattcaaaaggctcagaagtccttgatgcataccaagagtaccgaggacccc
actatggaagaaatcggggaattgacaggccttgacccctcccatgtggctgacttgctt
gctatcagccgtgagatggtcagcctcgatgcaccggtattcaatgataacgggaatagc
aatgtcggcgattttgtagaagataccggccgttcacccgaagactccctcctcgagggc
tcattgaaagcagatatttcaacagtattgtcaacgctcagtgacaaggaacgggatatc
attgaaatgcggtatggtctggaaggaaaagctccgatgtccctcaaggaaatcggtgaa
ctctacaacctgaccaaggaaagaattcgccagatcgaaaagaaagcccttgagagattg
aagaatccttcgagaagcagactcctggagagctacacagcctaa
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