Streptomyces griseus: SGR_2970
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Entry
SGR_2970 CDS
T00691
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgr
Streptomyces griseus
Pathway
sgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGR_2970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgr03019
]
SGR_2970
03400 DNA repair and recombination proteins [BR:
sgr03400
]
SGR_2970
Enzymes [BR:
sgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SGR_2970
Messenger RNA biogenesis [BR:
sgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SGR_2970
DNA repair and recombination proteins [BR:
sgr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SGR_2970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
BAG19799
Kitasato:
SGR2970
UniProt:
B1W505
LinkDB
All DBs
Position
complement(3467391..3469442)
Genome browser
AA seq
683 aa
AA seq
DB search
MDETTGTVAGTGTDTDGESEARRTLHRVFGYESFRGEQGAIIEHVVAGGDAVVLMPTGGG
KSLCYQIPSLVRRGTGVVVSPLIALMQDQVDALRALGVRAGFMNSTQDFDERRSMEAQFL
AGELDVLYLAPERLRLDSTLSLLARGEISVFAIDEAHCVAQWGHDFRPDYLALSVLGERW
PDVPRIALTATATNATHEEITRRLAMPDAKHFVASFDRPNIQYRIVPKSEPKKQLLTFLK
EEHAGDAGIVYCLSRNSTEKIAEYLCRNGVEAVPYHAGLDAGTRAAHQARFLREEGLVVV
ATIAFGMGIDKPDVRFVAHVDLPKSVEGYYQETGRAGRDGEPSTAWMAYGLQDVVQQRKL
IQGGEGDEAHRRRAAAHLDSMLALCETVQCRRAQLLTYFGQEPTAPACGNCDTCLTPPET
WDGTVVSQKLLSTVVRLKRERNQKFGAGQIIDILLGRKTAKVIQFDHDQLSVFGIGEDLA
EAEWRGVVRQLLAQGLLAVEGEYGTLVLTDESATVLGREREVLLRKEPKKPTSRSSSSAG
GGRGAKGKAAAADLPESAVPVFEALRAWRGATAKEQGVPAYVIFHDATLREIATLHPGSL
AELGGVSGLGEKKLATYGEGVLEVLAQTSPGAAEPPAAAAPAPAPGTAAPARDQAAPSAP
TQAPDARHSDPEFGWDEEPPEYE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaccaccgggacggtggccgggaccggcaccgacacggacggcgagagcgag
gcgcggcggacactgcaccgcgtcttcgggtacgagtcgttccgcggcgagcagggcgcg
atcatcgagcatgtggtggcgggcggcgacgccgtcgtgctcatgcccaccggcggtgga
aagtccctctgctaccagatcccgtccctggtcaggcggggcaccggcgtcgtcgtctcc
ccgctgatcgccctcatgcaggaccaggtcgacgccctgcgggcgctcggcgtccgggcc
ggcttcatgaactccacgcaggacttcgacgagcgccgctcgatggaggcgcagttcctc
gcgggcgagctggacgtgctctacctcgccccggagcggctgcggctggactccacgctc
tccctgctggcccggggcgagatctccgtcttcgcgatcgacgaggcgcactgcgtcgcc
cagtggggccacgacttccgccccgactacctggccctgtcggtgctcggcgagcgctgg
ccggacgtgccgcgcatcgccctgacggcgaccgcgacgaacgccacgcacgaggagatc
acccgccgcctcgccatgccggacgcgaagcacttcgtcgcgagcttcgaccggccgaac
atccagtaccggatcgtgccgaagtccgagcccaagaagcagctcctcaccttcctcaag
gaggagcacgccggggacgcgggcatcgtctactgcctctcgcgcaactccaccgagaag
atcgcggagtatctctgccgcaacggcgtggaggccgtgccgtaccacgcgggcctggac
gccgggacgcgcgccgcccaccaggcgcggttcctccgtgaggaggggctcgtcgtcgtc
gcgacgatcgcgttcggcatggggatcgacaagccggacgtccgcttcgtcgcccacgtc
gacctccccaagtccgtcgaggggtactaccaggagaccggccgtgcgggccgtgacggg
gagccgtcgacggcctggatggcgtacggactccaggacgtcgtccagcagcgcaagctc
atccagggaggcgagggcgacgaggcccaccgccgccgggccgccgcccacctggactcg
atgctggccctgtgcgagacggtccagtgccgccgggcccagctgctgacctacttcggc
caggagcccacggcccccgcctgcggcaactgcgacacctgcctgaccccgccggagacc
tgggacggcacggtcgtctcgcagaagctgctctccacggtggtgcggctgaagcgcgaa
cggaaccagaagttcggcgcgggccagatcatcgacatcctgctgggccgcaagaccgcc
aaggtcatccagttcgaccacgaccagctctccgtcttcggcatcggcgaggacctcgcg
gaggcggagtggcgcggtgtggtgcgccagctgctggcccaggggctgctcgcggtcgag
ggggagtacggcacgctggtcctgaccgacgagagcgcgacggtgctcggccgggagcgg
gaggtgctgctccgcaaggagccgaagaagcccacgtcccggtcgtcgtcctcggcgggc
ggcggcaggggagccaagggcaaggcggcagccgcggaccttcccgagtccgccgtcccg
gtcttcgaggcgctgcgcgcctggcgcggggcgacggcgaaggagcagggcgtcccggcg
tacgtgatcttccacgacgcgacgctgcgcgagatcgcgaccctgcacccgggctcgctc
gcggagctgggcggcgtcagcggcctgggcgagaagaagctcgcgacctacggggagggc
gtgctggaggtcctggcgcagacgtccccgggggcggcggagccccccgcagcggcggcc
ccggctcccgcaccgggcacggcggccccggcgcgtgaccaggccgcgccgtcggcccct
acgcaggccccggacgcgcggcacagcgacccggagttcggctgggacgaggagccgccg
gagtacgagtga
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