KEGG   Sporisorium graminicola: EX895_003233
Entry
EX895_003233      CDS       T09331                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sgra  Sporisorium graminicola
Pathway
sgra03030  DNA replication
sgra03410  Base excision repair
sgra03420  Nucleotide excision repair
sgra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sgra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EX895_003233
   03410 Base excision repair
    EX895_003233
   03420 Nucleotide excision repair
    EX895_003233
   03430 Mismatch repair
    EX895_003233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sgra03032]
    EX895_003233
   03400 DNA repair and recombination proteins [BR:sgra03400]
    EX895_003233
Enzymes [BR:sgra01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     EX895_003233
    6.5.1.6  DNA ligase (ATP or NAD+)
     EX895_003233
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     EX895_003233
DNA replication proteins [BR:sgra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    EX895_003233
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     EX895_003233
DNA repair and recombination proteins [BR:sgra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     EX895_003233
   NER (nucleotide excision repair)
    Other NER factors
     EX895_003233
   MMR (mismatch excision repair)
    Other MMR factors
     EX895_003233
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C eIF-3c_N
Other DBs
NCBI-GeneID: 40726128
NCBI-ProteinID: XP_029739637
LinkDB
Position
SGRAM_20:125289..127850
AA seq 853 aa
MTEQPKLAKFFGGGSSSSEGAAQGSAKPRQPDIKSAFAQKPPKTAPQPPSTNGSSTTKDA
APAPTTSSSSSKRDSSTSNGGAHGNADNASTDVSPPPQRKKRRIIESDDDDPDNEPVPPP
VSASAAAAPSSTKVASIFAKPPPKTSVTANKAQPIKDDATDTDSDSASEHVPADEDEDVE
DEEQAIEEEEQKGAKKLAAIFQRPSEVKEGKVTWKDGEAVPYAALASTFADIQATTKRLE
ITEILTQFLVRVIKRSPDNLLQVVYLCINRLCPDYEGLELGIGESLLIKAIAQSTGREVA
RIKKDLEAQGDLGLVALNSKKNQPTMFKVSSLKVPQVFKQLKEIAGVSGNKSQDRKIGMI
KKLLASCQGEEPKFLIRSLEGKLRIGLAERSVLVSLARAVVISRLGSKVSKLSQESLAKQ
LEDGTELVKAVYSELPSYDLVVPALLKGGVEGLREECKLTPGVPLKPMLAKPTKAISEVL
DRFEGKPFTCEYKYDGERAQVHLLPDGKLAVFSRNSENMSVKYPDLVEQIPRCINPSVKS
FVLDAEAAAWKKAEVDPETGVEEPAKLLPFQELSRRKRKDVKAEDIKVKVKLFAFDLLYL
NGEPLLSLPLSERRALLHAHFHPVDDEFDYARSEDCNSVEEISVFLDKSVKEGCEGLMVK
MLSGPDATYEPSRRSMNWLKLKKDYLAGTGDSLDLVVIGGYYGKGKRTNVYGAFLLACYD
ADSETYQTICKIGTGFTEQDLEAHYKTLKELEISGKKGYYDVGEAKPDVYFEAKVVWEVL
TADLSLSPVYTAAKGLIEQRGVSLRFPRFIRIRDDKTAEESTSPEQIESMYRSQVVNSSK
SKSGGGDDDDGFW
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgacggaacagccgaagctggccaagttctttggcggcggttcgagcagcagcgaaggt
gccgcacaaggatctgcaaaaccccgtcagccagacatcaagtcggctttcgcacaaaaa
ccacccaagacagctccccagccgccttcgaccaacggatcctccacaacaaaggatgct
gcaccggctcccaccacttcatcctcctcgtcgaagcgggattcctctaccagcaacggt
ggcgcccacggtaacgcggacaatgcgtcgaccgacgtatcacctccaccgcagagaaag
aagcgtcgcatcatcgagtcagacgacgacgatcccgacaatgagcccgttccacctccc
gtgtcagcatctgctgctgctgcgccgtccagcacaaaagtcgcctccatctttgccaag
ccaccgcctaagacaagcgtaaccgccaacaaggcccagcccatcaaggacgatgctacg
gacaccgactctgattcagccagcgagcacgttcctgccgacgaagacgaagacgtcgaa
gacgaagaacaggccatcgaagaagaggagcaaaagggcgccaaaaagctcgcagccatc
tttcagaggccttccgaagtcaaagaaggcaaagtcacatggaaggatggagaggccgta
ccctatgccgcgctcgcttccacctttgccgacatccaagccaccaccaagcggctcgag
atcaccgagatcctcacccagtttctcgtgcgcgtcatcaaacgatccccagacaatctg
ctgcaggtcgtctacctgtgcatcaaccgactgtgcccggactacgaaggcctcgagctg
ggtattggggaatcgctgcttatcaaagctattgctcagtcgacgggtcgtgaggtggcg
cgcatcaagaaggatctcgaggcgcaaggtgatctgggcctggtcgcgctcaattcgaaa
aagaaccagccgaccatgttcaaggtatccagcctcaaggtgccgcaggtgttcaagcag
ctgaaagagattgcgggggtgagcggcaacaagtcgcaggatcgcaagattggtatgatc
aagaaactgctcgcttcgtgtcagggcgaggaacccaagtttctcatccgctctctcgag
ggcaaacttcgcatcggcctcgctgaacggtccgtgctcgtctcgctcgctcgagccgtc
gtcatatctcgacttggctccaaagtctccaagttgtcccaagaatcgctcgccaagcag
ctcgaggacggcaccgagctcgtaaaagcagtatactctgaactgccctcctacgacctc
gttgtgcccgcgctgctcaagggcggagtggaaggtctgcgcgaagagtgcaagctgacc
cccggagttcccctcaaacccatgctggccaagccgaccaaagcgatctccgaagtgcta
gatcggttcgagggcaagccgttcacgtgtgaatacaagtacgatggcgaacgagcccag
gtgcacctgttgccagacggcaaattagcggtcttctcgcgaaattcggaaaacatgtcg
gtcaagtatccggacctagtcgagcagattccgcgctgcatcaacccatccgtcaagtcg
tttgtgctcgacgccgaggcggcagcctggaagaaggccgaagtcgacccggagacaggc
gtcgaggagccagcgaagctgctgccgttccaggagctctcgcgccgcaaacgtaaggac
gtcaaggcggaagatatcaaggtcaaggtcaagctcttcgcgttcgacctgctgtacctc
aacggcgagcctttgctctccctcccgctctcggaacgtcgcgcgctgctgcatgctcac
ttccaccccgtcgacgacgagttcgactacgcccgctccgaggactgcaactcggtcgaa
gagatctctgtgttcctcgacaagtccgtcaaagaaggctgcgagggtctcatggtcaag
atgctctccggacctgacgccacctacgagccctcgcgtcggtcgatgaactggctcaag
ctgaaaaaggactacctcgcgggaacaggcgattcgctcgacctcgtcgtcatcggcggc
tactacggcaagggcaaacgcaccaacgtctacggcgccttcctccttgcctgctacgac
gccgactcggaaacgtaccagaccatctgcaagatcggcactggcttcaccgagcaggac
ctcgaagcgcactacaagacgctcaaggagctcgagatcagcggcaagaagggctactac
gacgtcggcgaggccaaaccggatgtctactttgaggccaaggtggtatgggaggtattg
acggcggatctgagcttgagtcccgtgtatacggccgccaaggggttgattgagcagagg
ggagtcagtttgaggttccccaggttcatccggatccgcgacgataagacggcagaagag
agcaccagcccggagcagatcgagagcatgtatcgttcgcaggtggtgaacagcagtaag
agcaagagcgggggcggtgacgatgatgacggcttctggtag

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