Schistocerca gregaria (desert locust): 126284945
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Entry
126284945 CDS
T08688
Name
(RefSeq) DNA ligase 4-like isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
sgre
Schistocerca gregaria (desert locust)
Pathway
sgre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sgre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
126284945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgre03400
]
126284945
Enzymes [BR:
sgre01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
126284945
DNA repair and recombination proteins [BR:
sgre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
126284945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
DNA_ligase_IV
Use1
Motif
Other DBs
NCBI-GeneID:
126284945
NCBI-ProteinID:
XP_049840170
LinkDB
All DBs
Position
8:322958411..323575252
Genome browser
AA seq
915 aa
AA seq
DB search
MRYTLLKIYNLSAEQGDFGKMVLNIASEIKFCDLCEVCENIQKSPKEKACLILRKYITEY
RKLGERLKAEDQQAEISFYPVLRLLIPKFDRERSAYGVKEHALAKIYIRILCLPKDGMDA
LKLLNFRSPKAGVNQAGDFAEVAYFILKNRCGEGRKFTVADVNSRLDALAQKHAARDPRG
MDDELTQLLTGMSEMEQKWLIRMILKDMKLGVGHIGTFNAFHPDASALYDVSNDLSKVCT
LLHNPNKRLHEVEITIFSPVRPMLSEQCDIQKVENCMKNSAFYYIETKHDGERFQIHFMT
GTFKYFSRNGFDYTDIYGSNAMTGVLTPLLSKQLQPGVQSFIIDGEMMVWDKNIVAFRSK
GDNIDVKSSHLQPCYCVFDILFYNGEVLTNKPLRERIKYLNSLITPCEGVVLQTERNIVK
TKDEVIEHLNEAIDNKLEGIILKDPESVYKPNSRKAGWFKIKPEYTRGLMDQVDAIIIGG
YYGDGRRRGIISHFLLAAAVSKDGAEPEEFHSLVRVGSGFTMDKLEELIQKMKPHWRECS
PGEFPPGIIWTKEKPEVWIEPKNSYILQIKATEIVESSSFKVGYTLRFPRVEEIRYDKKW
TDCITVSELADLWQRASGKLYSRHASSIDPEASSPKKKRTSNHQPQLGKQFCSADVSTAT
IKSTLLEGKEFCVMSDYNGMTVQHIETQIYENGGKFVKNPGPSTFCVLAAEKNIRVQSHS
NSKQYNVIHTEWLLNSVASHKLLPWTPQNIISVTPETEREIMLQYDVFGDSYTEISTKEN
LKELLSKLESKVSVQKISVHEMADMDIELFSGPSPMGIFRLCIAYFDIPSEDDFEAFCVR
KSLELQKLDFEYYGGIVSTMIDDGTTHAVVHSRCHTRLEEIKLLNRERRKKIHIVNEKWI
IDCVDQCRQMDERNY
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagatacacattgctaaaaatttacaatctcagtgctgaacaaggtgactttggtaaa
atggtattgaatattgcatcagagataaaattctgtgacttgtgtgaagtatgcgagaat
attcaaaaaagtcccaaggaaaaggcatgtttgattctgaggaaatacatcactgaatat
agaaaactaggagagagactgaaagcagaggaccaacaggcagaaatcagcttctatcca
gtgctaaggttgttgataccaaagtttgacagagaaagatcagcatacggtgttaaagaa
catgctctggctaagatttatatacgcatactttgtctccctaaagatgggatggatgca
ttaaaactgctgaattttagatctccaaaagctggtgtgaatcaggcaggagattttgca
gaagtggcatactttattctgaaaaaccgatgtggagaaggaaggaaatttactgtggca
gatgtgaattcccgtctcgatgcactggctcagaaacatgcagctcgtgatcccagagga
atggatgatgagttaacacaattattaactggaatgtctgaaatggaacagaagtggtta
atcaggatgatactgaaggacatgaagcttggtgttggccacattggtactttcaacgca
tttcatcctgatgcctcagcactgtatgatgtatcaaatgatctaagcaaggtctgtacc
ctccttcataacccaaacaagcgcctgcatgaagtggaaataactatcttctctcctgtt
cgaccaatgctgtctgaacagtgtgatattcagaaggtggaaaattgcatgaagaacagt
gccttttattatatagagacaaaacatgatggagaaaggtttcagattcattttatgact
ggcacattcaagtatttttcaagaaatggctttgactatacagacatttatggcagcaat
gcaatgacaggagttctcacgccactgttgtcgaaacagttgcaacctggtgttcaaagc
ttcattattgatggagagatgatggtctgggacaagaacattgtcgcatttcgatccaaa
ggtgacaacattgatgtcaagtcaagtcatttacaaccatgctattgtgtgttcgacata
cttttttataatggtgaagttttgactaataagccattgcgtgagcgtatcaaatatctc
aacagtctcattactccttgtgaaggtgttgtgttacaaacagaaagaaatatagttaag
accaaggatgaagtgatagaacatttaaatgaagccattgacaataaattagagggaata
atccttaaagatccagagtcagtgtacaagccaaattcgaggaaagctggatggttcaaa
ataaagcctgagtatacacgaggtttaatggatcaagtggatgccataattattggtggt
tactatggtgatgggcgaagaagaggaatcattagccactttcttttggctgcagctgtt
tcaaaagatggagcagagccagaggagttccactccttagtacgtgttggttcagggttt
acaatggataagcttgaggaacttatacagaagatgaaaccacattggagggaatgttct
cctggggaattccctccgggtattatttggacgaaagagaaaccagaagtatggatagag
ccaaaaaattcttatattttgcagataaaagcaacagaaattgttgaaagtagctcattt
aaagtaggatatactttacggtttccacgagtggaagaaatacgctatgacaaaaagtgg
actgactgtattactgtgtcagaactggcagacttatggcaaagggcatcagggaaactc
tacagtcggcatgcttcctctattgatcctgaggcatcttctcccaaaaagaaaagaact
tcgaaccaccagccgcagcttggaaagcagttctgcagtgcagatgtttcaactgctaca
atcaaatcaactctcttagagggaaaggaattctgtgtcatgtctgactacaatggcatg
acggtgcaacacattgaaacacaaatttatgaaaatggaggaaaatttgtcaaaaatcct
ggtccttctacattttgtgtgctagctgccgaaaaaaacattcgagtacaaagtcattcc
aattcaaagcagtacaatgttatacacacagaatggcttttaaatagtgtagcaagtcac
aagctacttccatggactcctcaaaatattattagtgtgactccagaaactgaaagagaa
ataatgttgcaatatgatgtatttggtgacagttatactgaaatatccactaaagaaaac
ttgaaagaactgttatcaaaactggaatctaaggtttctgttcagaagatatcagttcat
gaaatggcagatatggacatagagctgttttcaggaccaagtccaatgggaatttttagg
ctatgcattgcatactttgatataccctctgaggatgactttgaagccttttgtgtaagg
aagagtcttgagctgcagaaattagattttgaatattatgggggaatagtgagcaccatg
attgatgatggaactacacatgctgttgtacactcaaggtgtcacacaaggcttgaagag
atcaaattattaaatagagaaagaaggaaaaaaattcatatagttaatgaaaaatggatt
atagactgtgtggaccaatgtcgtcagatggatgaaagaaactactga
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