Streptomyces graminofaciens: SGFS_040330
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Entry
SGFS_040330 CDS
T09325
Name
(GenBank) putative membrane protein
Organism
sgrf
Streptomyces graminofaciens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_3
PAS_9
PAS_8
Motif
Other DBs
NCBI-ProteinID:
BBC32739
LinkDB
All DBs
Position
complement(4642730..4645573)
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AA seq
947 aa
AA seq
DB search
MLALVCAAYAVGAALGWGDEQVALVMGDFGLAAAAAAAAVSCFRYARSRQSRFRPAWLLF
ALSSMMAALGNGVWGWYEVVLDRPVPSPSYADLFFLCFAPPAIVGLLVLAKRPVTKAGWV
CLMLDSWLIGGSLVTLSWSLALAQVTKFGGSNVAHTALNLAYPLLDIALVSMVLALHFRR
TSVHRPAVNTAIGALALTVMCDALFTSPLLHYSYRSGQLLDAGWFAGSLLLAYAPWTGRR
HGARSEESGHARVVHEHIPGQRHDGPQAGHVHVLLQGGGHSRYPANRPIAGSLAALTPYL
AAAVCTLGILYNVLSGRSVDRVVLITACTVVLALVVRQGIMLLDNITLTQELAQKENHFR
SLVQGSSDVIMIAAPNGILRYVSPAAAGVYGRPAEDLVGKELASIIHPEDLGCVVHEVRR
FLAASPGEEPTTRIECRFKSGDAGWLNVESTVNRHHGGLIFNSRDVTERVRLQAQLQHNA
EHDPLTDLPNRALFTKRVQQALSGRRSTDRGTAVLFIDLDGFKAVNDTIGHQAGDELLVQ
AARRLQDAVRYGDTASRLGGDEFAALIVGDGSRDRAARERSIFELADRLRITLSQPYVID
GNDVRVAASIGVSFAEPGLGAGELLRNADLAMYRAKASGKGRVELYKPQMQQDVVRKAEL
ATRLRAALHDGEFVLLHQPVVALETGRITSVSTQARWRSSQGVLFTPAEFLRVAEDGDKT
MELGRWVLEQAIEQAAGRAANGLNVPVAVRVSARQLLDRSLPGSVETLLTRHGLPSGCLV
LELSDIDTGTSLDELERRLTHLRRLGVQIALDGFDSGLVALTALRRLPVDVLKLDRGLVE
GIVESTPLHKITSGLVRIATDLGVRTVADGVDLPEQVIALRAMGCTHGQGAAFSGALDEY
RLRRALSTGHCPVPHGPAEPAFAAEGARRSEGLSKVVASAPTMAPRR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccctggtctgcgcggcctacgccgtcggtgccgcgctcggctggggcgatgag
caagtcgccctcgtcatgggcgacttcgggctcgccgccgcggccgcggccgccgccgtc
tcctgcttccgctacgcgcgcagccgccaaagccgctttcgacccgcctggctgctgttc
gccctctcctccatgatggcggcgctgggcaacggcgtatggggctggtacgaggtcgtc
ctcgaccggcccgtgcccagcccgagctacgccgacctgttcttcctctgcttcgcgcca
cccgcgatcgtcggcctgctggtgctcgccaagcggcccgtcaccaaggcgggctgggtc
tgcctcatgctggactcctggctgatcggcggctccctggtcaccctctcctggagcctc
gcgctcgcccaggtcaccaaattcggcgggtcgaacgtcgcgcacaccgcgctcaacctc
gcctaccccctgctcgacatcgccctggtcagcatggtgctcgcactgcacttccgccgc
acctcggtccaccgcccggcggtgaacaccgcgatcggcgcgctcgcgctcaccgtgatg
tgcgacgccctgttcacctcgcccctgctgcactacagctaccgctccggccaactcctc
gacgccggctggttcgcgggctccctgctcctcgcctacgccccctggaccggccgacgg
cacggagcccggtccgaggagagcggtcacgcgcgcgtggtgcacgagcacatccccggc
cagcggcacgacggaccgcaggcaggacacgtgcatgtgctcctccaaggaggaggtcac
agtcggtatccggccaaccgcccgatcgccggctcgctggccgccctcactccctacctg
gccgccgccgtctgcaccctcggcatcctctacaacgtcctgagcggccgcagcgtcgac
cgggtggtgctgatcaccgcctgcacggtcgtgctcgccctcgtggtccgccagggcatc
atgctcctcgacaacatcaccctcacccaggagctggcccagaaggagaaccacttccgc
tccctggtgcagggctccagcgacgtcatcatgatcgccgcacccaacggcatcctccgc
tacgtcagcccggccgccgccggcgtctacggccgtccggcggaggacctcgtcggcaag
gagctggcctcgatcatccaccccgaggacctcggctgcgtcgtccacgaggtgcgccgc
ttcctcgccgccagccccggcgaggagcccaccacccggatcgagtgccgcttcaagtcc
ggcgacgccggctggctgaacgtggagtccacggtcaacaggcaccacggcggcctcatc
ttcaacagccgggacgtgaccgagagagtgcgcctgcaggcccagctccagcacaacgcc
gagcacgacccgctcaccgacctgcccaaccgcgccctgttcaccaaacgggtccagcag
gccctctccggccgccgcagcaccgaccggggcacggccgtcctcttcatcgacctcgac
ggattcaaggcggtcaacgacacgatcgggcaccaggccggggacgagctgctcgtccag
gccgcccgcaggctccaggacgcggtccggtacggcgacacggcctcccgcctcggcggc
gacgagttcgcggccctcatcgtcggcgacggctcccgcgaccgcgccgcccgcgaacgg
agcatcttcgagctcgccgaccgcctccgtatcaccctctcgcagccgtacgtcatcgac
ggcaacgacgtccgggtggccgcctccatcggtgtctccttcgccgagccgggcctcggc
gcgggtgaactgctgcgcaacgccgacctcgccatgtaccgcgccaaggcctcaggcaag
ggccgcgtcgagctgtacaagccgcagatgcagcaggacgtcgtacgcaaggccgagctg
gccacccggctgcgggccgcgctgcacgacggcgagttcgtgctgctgcaccagcccgtg
gtcgccctggagaccggccggatcacctcggtctcgacccaggcccgctggcgctcctcc
cagggcgtgctgttcacgcccgccgagttcctgcgggtcgccgaggacggcgacaagacc
atggagctgggccgctgggtgctcgaacaggccatagagcaggctgccgggcgcgccgcg
aacggcctgaacgtaccggtggccgtccgggtgagcgcccgccaactgctggaccgctcg
ctgcccggctccgtggagacgctcctgacccggcacggactcccttccgggtgcctggtg
ctcgaactgtccgacatcgacaccggcacgtccctggacgagctggagcgccggctgacg
catctgcgcaggctcggcgtgcagatcgccctggacggcttcgacagcggcctcgtggcc
ctcacggcgctgcggcggcttcccgtcgacgtactgaagctggaccgggggctcgtcgag
gggatcgtggagtccacgccgctgcacaagatcaccagcgggctggtgcgcatcgccacc
gacctgggggtgcggaccgtggccgacggggtggacctgcccgagcaggtcatcgccctg
cgcgcgatgggctgcacccacggccagggtgccgccttctccggagcgctggacgagtac
cgcctgcgccgggccctgtccacgggccactgtccggtgccgcacggaccggcggaaccc
gcgttcgcggccgagggcgcacggaggtccgaagggctgagcaaggtcgtggcctcggcg
ccgaccatggcgccccggaggtga
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