KEGG   Streptomyces graminofaciens: SGFS_087820
Entry
SGFS_087820       CDS       T09325                                 
Name
(GenBank) Pectate lyase
  KO
K01051  pectinesterase [EC:3.1.1.11]
K01728  pectate lyase [EC:4.2.2.2]
Organism
sgrf  Streptomyces graminofaciens
Pathway
sgrf00040  Pentose and glucuronate interconversions
sgrf01100  Metabolic pathways
sgrf02020  Two-component system
sgrf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sgrf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    SGFS_087820
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SGFS_087820
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SGFS_087820
Enzymes [BR:sgrf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.1  Carboxylic-ester hydrolases
    3.1.1.11  pectinesterase
     SGFS_087820
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     SGFS_087820
SSDB
Motif
Pfam: Pectinesterase Pectate_lyase_4 Beta_helix DUF6531
Other DBs
NCBI-ProteinID: BBC37488
LinkDB
Position
9758818..9760791
AA seq 657 aa
MTHLRSKRLPGRGRSLAAVTVLVASFVVGAFTPAEAAQPAAAPRWADEPHGFASLAGGTT
GGEGGKVVTVTDQVSLVRYASAAEPYVIRVKGAIDVEPFGSDVVVASNKTLIGVGDTGEI
VHGELHLGPGTSNVIIRNLTIRDSYVEGDWDGKTTDFDAIQMDTVDHVWIDHNRFEHMGD
GLLDIRKDSRYITVSYNQFKNHNKAFGIGWTSNVQTEITVDHNWFSGTKQRNPSADNCAY
AHLYNNYLSAQVTDGDPVWTYGNWSRGRTRMVIENSYYDGVQHPYQADATAELVQRGSIL
KNVSGRQDVWGEAFDPRDFYAYRLDPAAAVPALVTRFSGPQKRIGTNTTLQVPGAYPTVQ
AAVDAVPDGNDGTVTIRIAPGTYREQVRIPAGKPKLVLQGTGQDRADTVIVYDTPAAYGG
SNGSATVRIAANDVTARHLTFSNDFDEAAHELNGEQALAMKTVGDRIVFEDTAFLGNQDT
LMTDSPRLDVISRVYIRDSYIEGDVDFIYGRATTVIERSVIKALSRGSDTNNGYITAAST
WKDNPYGFLITKSKVISDAPAGSFHLGRPWHPGGEPAAIAQVLFRDTELPAAIKSAPWTD
MSGFSWKDARFTEYRAYGPGAGAGADRPQLPAADAGTYTVGKYLAGVDGWAPHTVRR
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgacgcacctccgtagcaagcgcttgccaggcagggggagatccctcgccgccgtcacc
gtgctggtggcctcgttcgtcgtcggcgcgttcacccccgccgaggccgctcagcccgcc
gcggctccccggtgggccgacgagccccatggcttcgcgtccctcgccggcggtaccacc
ggtggcgagggagggaaggtggtgacggtcaccgaccaggtgtccctggtgaggtacgcg
tccgctgcggagccgtacgtcatccgggtcaaaggggcgatcgacgtcgagcccttcggt
tcggacgtggtcgtggcctcgaacaagaccctgatcggcgtcggcgacaccggcgagatc
gtgcacggagagctgcacctgggccccggcaccagcaacgtcatcatccgcaatctgacg
atccgcgactcctacgtcgagggcgactgggacggcaagacgaccgacttcgacgcgatc
cagatggacaccgtcgaccacgtctggatcgaccacaaccgcttcgagcacatgggcgac
gggctgctcgacatccgcaaggacagccggtacatcaccgtctcctacaaccagttcaag
aaccacaacaaggccttcggcatcggctggaccagcaacgtccagaccgagatcacggtg
gaccacaactggttcagcggcaccaaacagcgcaacccgtccgccgacaactgcgcctac
gcgcacctctacaacaactacctctcggcccaggtgaccgacggcgaccccgtgtggacg
tacgggaactggtcgcgcggcaggaccaggatggtcatcgagaacagctactacgacggc
gtccagcatccctaccaggcggatgccacagccgagttggtgcagcgcgggtcgatcctg
aagaacgtcagcgggcggcaggacgtctggggtgaggccttcgacccgagggacttctac
gcctaccggctcgacccggccgccgccgtgcccgcgctggtcacccgcttctccgggccg
cagaagcggatcggcacgaacacgactcttcaggtcccgggcgcgtatccgaccgtgcag
gcagccgtggacgccgtgcccgacggcaacgacggcacggtcacgatccggatcgcgccc
ggcacctaccgcgagcaggtccgcattcccgcgggcaagccgaagttggtgctgcagggg
actggacaggatcgcgccgacaccgtcatcgtctacgacacgcccgccgcgtacggcggc
tccaacggcagcgccacggtacggatcgccgcgaacgacgtcacggcccgccacctcacc
ttcagcaacgacttcgacgaggccgcgcacgagctgaacggcgagcaggccctcgcgatg
aagacggtcggcgaccggatcgtcttcgaggacaccgcgttcctgggcaaccaggacacc
ctgatgaccgacagcccccggctcgacgtgatcagccgggtctacatccgcgactcgtac
atcgagggcgatgtcgacttcatctacggccgggcgaccacggtcatcgagcggtccgtc
atcaaggcgctgagccgcggctcggacaccaacaacggctacatcacggccgcctcgacc
tggaaggacaacccgtacggattcctgatcacgaagtcgaaggtgatcagcgacgcgcct
gccgggtccttccacctcggccggccctggcacccgggcggcgagcccgccgccatcgcc
caagtgctgttccgcgacaccgagttgcccgccgcgatcaagtccgcgccgtggaccgac
atgagcggcttctcgtggaaggacgcccggttcacggagtaccgcgcctacgggccgggc
gcgggcgcgggcgccgaccggccgcagctgccggcggcggacgcggggacgtacacggtc
ggcaagtacctggcgggcgtggacggctgggcgccgcacaccgtccggcgctga

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