Streptomyces gardneri: H4W23_16280
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Entry
H4W23_16280 CDS
T07252
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00300
Lysine biosynthesis
sgx00470
D-Amino acid metabolism
sgx01100
Metabolic pathways
sgx01110
Biosynthesis of secondary metabolites
sgx01120
Microbial metabolism in diverse environments
sgx01230
Biosynthesis of amino acids
Module
sgx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H4W23_16280
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H4W23_16280
Enzymes [BR:
sgx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H4W23_16280
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QPK46037
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Position
3646195..3647520
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AA seq
441 aa
AA seq
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MGRMASYRRDLAVRASVDQGLLSPAEPVVALLDTTGIRASAAALTSAFAAVTDTRVLHAF
AVKAAPLVPVLRLLHDAGLGVEVASPGELALARAAGIPPTHTVLDSPAKTPAELRQALAL
GIAVNADNLQELDRLDALVASAPTASPLGLRVNPQVGAGSIGALSTATATSKFGVALRDE
GARAAVVQAYLDRPWLTRLHTHTGSQGVPLALMAEGVGEAYALAEEINHKAGRQQIDTLD
IGGGLPVNFTSDEETPTYAEYARLLADTAPGLLDGRYRLVTEFGRSLLAKHGTVLARVEY
TKTSGGRPIAVTHAGVQLATRTVYAPESWPLRILAYDAEGRPRAGDITVQDVAGPACFAG
DLLATGRELPLLHPGDVVAVPDTGAYCFAHHYAYNSLPRPAIHGFTVADDGAVTFSTVRK
AQTLDEIVAEAGGAHANALVR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcatggcctcctaccgccgtgatctcgccgtccgagcctccgtcgaccaagga
ctcctctcccccgccgaacccgtcgtcgcgctcctcgacaccaccggcatccgcgcctcc
gccgccgccctgaccagcgctttcgccgccgtcaccgacacccgcgtcctccacgccttc
gccgtcaaggccgccccgctcgtccccgtcctgcgcctcctccacgacgcggggctcggc
gtcgaggtcgccagccccggcgagctcgccctcgcccgcgccgccgggatcccgcccacc
cacaccgtgctcgactcccccgccaagaccccggccgagctgcgccaggccctcgcgctc
gggatcgccgtcaacgccgacaacctccaggagctggaccgcctcgacgcgctcgtcgcc
tccgcacccaccgcctcacccctcggactccgggtgaacccgcaggtcggggccggttcc
atcggcgcgctctcgaccgcgaccgccacctccaaattcggcgtggcgctccgcgacgag
ggcgcccgcgcggccgtcgtccaggcctacctggaccgcccctggctcacccggctgcac
acccacaccggctcccagggcgtcccgctcgccctgatggccgaaggcgtcggggaggcc
tacgccctcgccgaggagatcaaccacaaggcgggccgacagcagatcgacaccctcgac
atcggcggcggcctgccggtcaacttcacctccgacgaggagacgccgacgtacgccgag
tacgcccggctgctcgccgacaccgcgcccggactcctcgacggccgctaccggctcgtc
accgagttcggccgctccctgctcgccaagcacggcacggtcctcgcccgggtcgagtac
acgaagacctccgggggccgcccgatcgccgtcacccacgcgggcgtccagctcgccacc
cgcacggtctacgcccccgaatcctggccgctgcggatcctcgcgtacgacgccgagggc
cgcccccgcgccggggacatcaccgtccaggacgtggcgggccccgcctgcttcgccggg
gacctgctcgccaccggccgggagctgccgctgctgcacccgggggacgtcgtggccgtc
ccggacaccggcgcgtactgcttcgcccaccactacgcgtacaacagcctgccccggccc
gcgatccacggattcacggtggccgacgacggggcggtgacgttctcgacggtgcggaag
gcccagacgctcgacgagatcgtcgcggaggcgggcggggcacacgcgaacgccctcgtc
cggtag
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