Streptomyces gardneri: H4W23_37580
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Entry
H4W23_37580 CDS
T07252
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00521
Streptomycin biosynthesis
sgx00523
Polyketide sugar unit biosynthesis
sgx00541
O-Antigen nucleotide sugar biosynthesis
sgx01100
Metabolic pathways
sgx01110
Biosynthesis of secondary metabolites
sgx01250
Biosynthesis of nucleotide sugars
Module
sgx_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
H4W23_37580 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H4W23_37580 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H4W23_37580 (rfbC)
Enzymes [BR:
sgx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
H4W23_37580 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QPK49751
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All DBs
Position
complement(8393174..8393725)
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AA seq
183 aa
AA seq
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MKATEVPEIAGAYLFEPTPHADERGFFSRTFDANVLRSVGLDPNAFVQDSLSRSVRGVLR
GLHLRSGAGEAKLVRCSYGRIFDVVVDLRADSPTYGNRAFFELSDETQATLYIPAGCAHG
FQALTETADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPATSMSRRDREAPSLAEVLKQ
KES
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaccgaagtcccggagatcgccggcgcgtacctgttcgagccgacgccgcac
gccgacgagcgcggcttcttcagccgtaccttcgacgccaacgtgctccgctcggtgggc
ctcgacccgaacgccttcgtccaggacagcctgtcccgctcggtgcggggcgtgctgcgc
ggtctgcacctgcgctccggcgccggcgaggccaagctcgtgcggtgctcgtacgggagg
atcttcgacgtcgtcgtggacctgcgggcggactcgccgacctacgggaaccgggccttc
ttcgagctgtccgacgagacgcaggcgaccctgtacatcccggcggggtgcgcccacggc
ttccaggcgctgaccgagaccgccgacacctcgtaccggatcgaccgcccgcacgatccg
gccgaggacgtgacgatcgccttcgacgacccggagctcgccattccctggccgctgccg
gccacctcgatgtcccggcgggaccgggaggccccgagcctcgccgaggtcctgaagcag
aaggagagctga
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